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METTL7B (methyltransferase like 7B)

Identity

Alias_symbol (synonym)MGC17301
ALDI
Other alias
HGNC (Hugo) METTL7B
LocusID (NCBI) 196410
Atlas_Id 68928
Location 12q13.2  [Link to chromosome band 12q13]
Location_base_pair Starts at 55681546 and ends at 55684610 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL7B   28276
Cards
Entrez_Gene (NCBI)METTL7B  196410  methyltransferase like 7B
AliasesALDI
GeneCards (Weizmann)METTL7B
Ensembl hg19 (Hinxton)ENSG00000170439 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170439 [Gene_View]  chr12:55681546-55684610 [Contig_View]  METTL7B [Vega]
ICGC DataPortalENSG00000170439
TCGA cBioPortalMETTL7B
AceView (NCBI)METTL7B
Genatlas (Paris)METTL7B
WikiGenes196410
SOURCE (Princeton)METTL7B
Genetics Home Reference (NIH)METTL7B
Genomic and cartography
GoldenPath hg38 (UCSC)METTL7B  -     chr12:55681546-55684610 +  12q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)METTL7B  -     12q13.2   [Description]    (hg19-Feb_2009)
EnsemblMETTL7B - 12q13.2 [CytoView hg19]  METTL7B - 12q13.2 [CytoView hg38]
Mapping of homologs : NCBIMETTL7B [Mapview hg19]  METTL7B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK290112 AY358508 BC020509
RefSeq transcript (Entrez)NM_152637
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)METTL7B
Cluster EST : UnigeneHs.51483 [ NCBI ]
CGAP (NCI)Hs.51483
Alternative Splicing GalleryENSG00000170439
Gene ExpressionMETTL7B [ NCBI-GEO ]   METTL7B [ EBI - ARRAY_EXPRESS ]   METTL7B [ SEEK ]   METTL7B [ MEM ]
Gene Expression Viewer (FireBrowse)METTL7B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196410
GTEX Portal (Tissue expression)METTL7B
Human Protein AtlasENSG00000170439-METTL7B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UX53   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UX53  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UX53
Splice isoforms : SwissVarQ6UX53
Catalytic activity : Enzyme2.1.1.- [ Enzyme-Expasy ]   2.1.1.-2.1.1.- [ IntEnz-EBI ]   2.1.1.- [ BRENDA ]   2.1.1.- [ KEGG ]   
PhosPhoSitePlusQ6UX53
Domains : Interpro (EBI)Methyltransf_11    SAM-dependent_MTases   
Domain families : Pfam (Sanger)Methyltransf_11 (PF08241)   
Domain families : Pfam (NCBI)pfam08241   
Conserved Domain (NCBI)METTL7B
DMDM Disease mutations196410
Blocks (Seattle)METTL7B
SuperfamilyQ6UX53
Human Protein Atlas [tissue]ENSG00000170439-METTL7B [tissue]
Peptide AtlasQ6UX53
HPRD14458
IPIIPI00090807   
Protein Interaction databases
DIP (DOE-UCLA)Q6UX53
IntAct (EBI)Q6UX53
FunCoupENSG00000170439
BioGRIDMETTL7B
STRING (EMBL)METTL7B
ZODIACMETTL7B
Ontologies - Pathways
QuickGOQ6UX53
Ontology : AmiGOmethyltransferase activity  methylation  
Ontology : EGO-EBImethyltransferase activity  methylation  
NDEx NetworkMETTL7B
Atlas of Cancer Signalling NetworkMETTL7B
Wikipedia pathwaysMETTL7B
Orthology - Evolution
OrthoDB196410
GeneTree (enSembl)ENSG00000170439
Phylogenetic Trees/Animal Genes : TreeFamMETTL7B
HOVERGENQ6UX53
HOGENOMQ6UX53
Homologs : HomoloGeneMETTL7B
Homology/Alignments : Family Browser (UCSC)METTL7B
Gene fusions - Rearrangements
Fusion: Tumor Portal METTL7B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL7B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL7B
dbVarMETTL7B
ClinVarMETTL7B
1000_GenomesMETTL7B 
Exome Variant ServerMETTL7B
ExAC (Exome Aggregation Consortium)ENSG00000170439
GNOMAD BrowserENSG00000170439
Genetic variants : HAPMAP196410
Genomic Variants (DGV)METTL7B [DGVbeta]
DECIPHERMETTL7B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMETTL7B 
Mutations
ICGC Data PortalMETTL7B 
TCGA Data PortalMETTL7B 
Broad Tumor PortalMETTL7B
OASIS PortalMETTL7B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMETTL7B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMETTL7B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch METTL7B
DgiDB (Drug Gene Interaction Database)METTL7B
DoCM (Curated mutations)METTL7B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL7B (select a term)
intoGenMETTL7B
Cancer3DMETTL7B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMETTL7B
Genetic Testing Registry METTL7B
NextProtQ6UX53 [Medical]
TSGene196410
GENETestsMETTL7B
Target ValidationMETTL7B
Huge Navigator METTL7B [HugePedia]
snp3D : Map Gene to Disease196410
BioCentury BCIQMETTL7B
ClinGenMETTL7B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196410
Chemical/Pharm GKB GenePA143485533
Clinical trialMETTL7B
Miscellaneous
canSAR (ICR)METTL7B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL7B
EVEXMETTL7B
GoPubMedMETTL7B
iHOPMETTL7B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:12:37 CET 2017

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