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METTL9 (methyltransferase like 9)

Identity

Alias_symbol (synonym)DREV1
Other aliasCGI-81
DREV
PAP1
HGNC (Hugo) METTL9
LocusID (NCBI) 51108
Atlas_Id 68930
Location 16p12.2  [Link to chromosome band 16p12]
Location_base_pair Starts at 21599476 and ends at 21657473 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MED13L (12q24.21) / METTL9 (16p12.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL9   24586
Cards
Entrez_Gene (NCBI)METTL9  51108  methyltransferase like 9
AliasesCGI-81; DREV; DREV1; PAP1
GeneCards (Weizmann)METTL9
Ensembl hg19 (Hinxton)ENSG00000197006 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197006 [Gene_View]  chr16:21599476-21657473 [Contig_View]  METTL9 [Vega]
ICGC DataPortalENSG00000197006
TCGA cBioPortalMETTL9
AceView (NCBI)METTL9
Genatlas (Paris)METTL9
WikiGenes51108
SOURCE (Princeton)METTL9
Genetics Home Reference (NIH)METTL9
Genomic and cartography
GoldenPath hg38 (UCSC)METTL9  -     chr16:21599476-21657473 +  16p12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)METTL9  -     16p12.2   [Description]    (hg19-Feb_2009)
EnsemblMETTL9 - 16p12.2 [CytoView hg19]  METTL9 - 16p12.2 [CytoView hg38]
Mapping of homologs : NCBIMETTL9 [Mapview hg19]  METTL9 [Mapview hg38]
OMIM609388   
Gene and transcription
Genbank (Entrez)AF151839 AI096621 AJ278577 AJ278578 AK025565
RefSeq transcript (Entrez)NM_001077180 NM_001288659 NM_001288660 NM_016025
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)METTL9
Cluster EST : UnigeneHs.709488 [ NCBI ]
CGAP (NCI)Hs.709488
Alternative Splicing GalleryENSG00000197006
Gene ExpressionMETTL9 [ NCBI-GEO ]   METTL9 [ EBI - ARRAY_EXPRESS ]   METTL9 [ SEEK ]   METTL9 [ MEM ]
Gene Expression Viewer (FireBrowse)METTL9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51108
GTEX Portal (Tissue expression)METTL9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H1A3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H1A3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H1A3
Splice isoforms : SwissVarQ9H1A3
PhosPhoSitePlusQ9H1A3
Domains : Interpro (EBI)DREV_MeTrfase    SAM-dependent_MTases   
Domain families : Pfam (Sanger)DREV (PF05219)   
Domain families : Pfam (NCBI)pfam05219   
Conserved Domain (NCBI)METTL9
DMDM Disease mutations51108
Blocks (Seattle)METTL9
SuperfamilyQ9H1A3
Human Protein AtlasENSG00000197006
Peptide AtlasQ9H1A3
HPRD16839
IPIIPI00100239   IPI00396595   IPI01009574   
Protein Interaction databases
DIP (DOE-UCLA)Q9H1A3
IntAct (EBI)Q9H1A3
FunCoupENSG00000197006
BioGRIDMETTL9
STRING (EMBL)METTL9
ZODIACMETTL9
Ontologies - Pathways
QuickGOQ9H1A3
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkMETTL9
Atlas of Cancer Signalling NetworkMETTL9
Wikipedia pathwaysMETTL9
Orthology - Evolution
OrthoDB51108
GeneTree (enSembl)ENSG00000197006
Phylogenetic Trees/Animal Genes : TreeFamMETTL9
HOVERGENQ9H1A3
HOGENOMQ9H1A3
Homologs : HomoloGeneMETTL9
Homology/Alignments : Family Browser (UCSC)METTL9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL9
dbVarMETTL9
ClinVarMETTL9
1000_GenomesMETTL9 
Exome Variant ServerMETTL9
ExAC (Exome Aggregation Consortium)METTL9 (select the gene name)
Genetic variants : HAPMAP51108
Genomic Variants (DGV)METTL9 [DGVbeta]
DECIPHERMETTL9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMETTL9 
Mutations
ICGC Data PortalMETTL9 
TCGA Data PortalMETTL9 
Broad Tumor PortalMETTL9
OASIS PortalMETTL9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMETTL9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMETTL9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch METTL9
DgiDB (Drug Gene Interaction Database)METTL9
DoCM (Curated mutations)METTL9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL9 (select a term)
intoGenMETTL9
Cancer3DMETTL9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609388   
Orphanet
MedgenMETTL9
Genetic Testing Registry METTL9
NextProtQ9H1A3 [Medical]
TSGene51108
GENETestsMETTL9
Target ValidationMETTL9
Huge Navigator METTL9 [HugePedia]
snp3D : Map Gene to Disease51108
BioCentury BCIQMETTL9
ClinGenMETTL9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51108
Chemical/Pharm GKB GenePA145148428
Clinical trialMETTL9
Miscellaneous
canSAR (ICR)METTL9 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL9
EVEXMETTL9
GoPubMedMETTL9
iHOPMETTL9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:27:15 CEST 2017

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