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MEX3B (mex-3 RNA binding family member B)

Identity

Alias (NCBI)MEX-3B
RKHD3
RNF195
HGNC (Hugo) MEX3B
HGNC Alias symbDKFZp434J0617
RNF195
HGNC Previous nameRKHD3
HGNC Previous namering finger and KH domain containing 3
 mex-3 homolog B (C. elegans)
LocusID (NCBI) 84206
Atlas_Id 47358
Location 15q25.2  [Link to chromosome band 15q25]
Location_base_pair Starts at 82041778 and ends at 82046018 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MEX3B   25297
Cards
Entrez_Gene (NCBI)MEX3B    mex-3 RNA binding family member B
AliasesMEX-3B; RKHD3; RNF195
GeneCards (Weizmann)MEX3B
Ensembl hg19 (Hinxton)ENSG00000183496 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183496 [Gene_View]  ENSG00000183496 [Sequence]  chr15:82041778-82046018 [Contig_View]  MEX3B [Vega]
ICGC DataPortalENSG00000183496
TCGA cBioPortalMEX3B
AceView (NCBI)MEX3B
Genatlas (Paris)MEX3B
SOURCE (Princeton)MEX3B
Genetics Home Reference (NIH)MEX3B
Genomic and cartography
GoldenPath hg38 (UCSC)MEX3B  -     chr15:82041778-82046018 -  15q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MEX3B  -     15q25.2   [Description]    (hg19-Feb_2009)
GoldenPathMEX3B - 15q25.2 [CytoView hg19]  MEX3B - 15q25.2 [CytoView hg38]
ImmunoBaseENSG00000183496
genome Data Viewer NCBIMEX3B [Mapview hg19]  
OMIM611008   
Gene and transcription
Genbank (Entrez)AA442153 AB095929 AK094145 AK094633 AK131424
RefSeq transcript (Entrez)NM_032246
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MEX3B
Alternative Splicing GalleryENSG00000183496
Gene ExpressionMEX3B [ NCBI-GEO ]   MEX3B [ EBI - ARRAY_EXPRESS ]   MEX3B [ SEEK ]   MEX3B [ MEM ]
Gene Expression Viewer (FireBrowse)MEX3B [ Firebrowse - Broad ]
GenevisibleExpression of MEX3B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84206
GTEX Portal (Tissue expression)MEX3B
Human Protein AtlasENSG00000183496-MEX3B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZN04   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZN04  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZN04
Splice isoforms : SwissVarQ6ZN04
PhosPhoSitePlusQ6ZN04
Domaine pattern : Prosite (Expaxy)KH_TYPE_1 (PS50084)    ZF_RING_2 (PS50089)   
Domains : Interpro (EBI)KH_dom    KH_dom_type_1    KH_dom_type_1_sf    Znf_RING    Znf_RING/FYVE/PHD   
Domain families : Pfam (Sanger)KH_1 (PF00013)   
Domain families : Pfam (NCBI)pfam00013   
Domain families : Smart (EMBL)KH (SM00322)  RING (SM00184)  
Conserved Domain (NCBI)MEX3B
Blocks (Seattle)MEX3B
SuperfamilyQ6ZN04
Human Protein Atlas [tissue]ENSG00000183496-MEX3B [tissue]
Peptide AtlasQ6ZN04
HPRD15256
IPIIPI00300213   IPI00829592   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZN04
IntAct (EBI)Q6ZN04
BioGRIDMEX3B
STRING (EMBL)MEX3B
ZODIACMEX3B
Ontologies - Pathways
QuickGOQ6ZN04
Ontology : AmiGOP-body  RNA binding  calcium ion binding  nucleoplasm  cytosol  protein phosphorylation  protein autophosphorylation  
Ontology : EGO-EBIP-body  RNA binding  calcium ion binding  nucleoplasm  cytosol  protein phosphorylation  protein autophosphorylation  
NDEx NetworkMEX3B
Atlas of Cancer Signalling NetworkMEX3B
Wikipedia pathwaysMEX3B
Orthology - Evolution
OrthoDB84206
GeneTree (enSembl)ENSG00000183496
Phylogenetic Trees/Animal Genes : TreeFamMEX3B
HOGENOMQ6ZN04
Homologs : HomoloGeneMEX3B
Homology/Alignments : Family Browser (UCSC)MEX3B
Gene fusions - Rearrangements
Fusion : QuiverMEX3B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMEX3B [hg38]
dbVarMEX3B
ClinVarMEX3B
MonarchMEX3B
1000_GenomesMEX3B 
Exome Variant ServerMEX3B
GNOMAD BrowserENSG00000183496
Varsome BrowserMEX3B
Genomic Variants (DGV)MEX3B [DGVbeta]
DECIPHERMEX3B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMEX3B 
Mutations
ICGC Data PortalMEX3B 
TCGA Data PortalMEX3B 
Broad Tumor PortalMEX3B
OASIS PortalMEX3B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMEX3B  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMEX3B
Mutations and Diseases : HGMDMEX3B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MEX3B
DgiDB (Drug Gene Interaction Database)MEX3B
DoCM (Curated mutations)MEX3B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MEX3B (select a term)
intoGenMEX3B
Cancer3DMEX3B(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611008   
Orphanet
DisGeNETMEX3B
MedgenMEX3B
Genetic Testing Registry MEX3B
NextProtQ6ZN04 [Medical]
GENETestsMEX3B
Target ValidationMEX3B
Huge Navigator MEX3B [HugePedia]
ClinGenMEX3B
Clinical trials, drugs, therapy
MyCancerGenomeMEX3B
Protein Interactions : CTD
Pharm GKB GenePA162395820
PharosQ6ZN04
Clinical trialMEX3B
Miscellaneous
canSAR (ICR)MEX3B (select the gene name)
HarmonizomeMEX3B
DataMed IndexMEX3B
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMEX3B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jan 1 18:24:39 CET 2021
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