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MEX3C (mex-3 RNA binding family member C)

Identity

Alias_namesRKHD2
ring finger and KH domain containing 2
mex-3 homolog C (C. elegans)
Alias_symbol (synonym)FLJ38871
RNF194
Other aliasBM-013
MEX-3C
HGNC (Hugo) MEX3C
LocusID (NCBI) 51320
Atlas_Id 47496
Location 18q21.2  [Link to chromosome band 18q21]
Location_base_pair Starts at 51174550 and ends at 51197681 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MEX3C   28040
Cards
Entrez_Gene (NCBI)MEX3C  51320  mex-3 RNA binding family member C
AliasesBM-013; MEX-3C; RKHD2; RNF194
GeneCards (Weizmann)MEX3C
Ensembl hg19 (Hinxton)ENSG00000176624 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176624 [Gene_View]  chr18:51174550-51197681 [Contig_View]  MEX3C [Vega]
ICGC DataPortalENSG00000176624
TCGA cBioPortalMEX3C
AceView (NCBI)MEX3C
Genatlas (Paris)MEX3C
WikiGenes51320
SOURCE (Princeton)MEX3C
Genetics Home Reference (NIH)MEX3C
Genomic and cartography
GoldenPath hg38 (UCSC)MEX3C  -     chr18:51174550-51197681 -  18q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MEX3C  -     18q21.2   [Description]    (hg19-Feb_2009)
EnsemblMEX3C - 18q21.2 [CytoView hg19]  MEX3C - 18q21.2 [CytoView hg38]
Mapping of homologs : NCBIMEX3C [Mapview hg19]  MEX3C [Mapview hg38]
OMIM611005   
Gene and transcription
Genbank (Entrez)AF208855 AK096190 AL833519 AW079942 AY950679
RefSeq transcript (Entrez)NM_016626
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MEX3C
Cluster EST : UnigeneHs.465144 [ NCBI ]
CGAP (NCI)Hs.465144
Alternative Splicing GalleryENSG00000176624
Gene ExpressionMEX3C [ NCBI-GEO ]   MEX3C [ EBI - ARRAY_EXPRESS ]   MEX3C [ SEEK ]   MEX3C [ MEM ]
Gene Expression Viewer (FireBrowse)MEX3C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51320
GTEX Portal (Tissue expression)MEX3C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5U5Q3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5U5Q3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5U5Q3
Splice isoforms : SwissVarQ5U5Q3
Catalytic activity : Enzyme2.3.2.27 [ Enzyme-Expasy ]   2.3.2.272.3.2.27 [ IntEnz-EBI ]   2.3.2.27 [ BRENDA ]   2.3.2.27 [ KEGG ]   
PhosPhoSitePlusQ5U5Q3
Domaine pattern : Prosite (Expaxy)KH_TYPE_1 (PS50084)    ZF_RING_2 (PS50089)   
Domains : Interpro (EBI)KH_dom    KH_dom_type_1    Znf_RING    Znf_RING/FYVE/PHD   
Domain families : Pfam (Sanger)KH_1 (PF00013)   
Domain families : Pfam (NCBI)pfam00013   
Domain families : Smart (EMBL)KH (SM00322)  RING (SM00184)  
Conserved Domain (NCBI)MEX3C
DMDM Disease mutations51320
Blocks (Seattle)MEX3C
SuperfamilyQ5U5Q3
Human Protein AtlasENSG00000176624
Peptide AtlasQ5U5Q3
HPRD15255
IPIIPI00790901   
Protein Interaction databases
DIP (DOE-UCLA)Q5U5Q3
IntAct (EBI)Q5U5Q3
FunCoupENSG00000176624
BioGRIDMEX3C
STRING (EMBL)MEX3C
ZODIACMEX3C
Ontologies - Pathways
QuickGOQ5U5Q3
Ontology : AmiGOchondrocyte hypertrophy  RNA binding  protein binding  nucleus  cytoplasm  zinc ion binding  transferase activity  regulation of fat cell differentiation  energy homeostasis  
Ontology : EGO-EBIchondrocyte hypertrophy  RNA binding  protein binding  nucleus  cytoplasm  zinc ion binding  transferase activity  regulation of fat cell differentiation  energy homeostasis  
NDEx NetworkMEX3C
Atlas of Cancer Signalling NetworkMEX3C
Wikipedia pathwaysMEX3C
Orthology - Evolution
OrthoDB51320
GeneTree (enSembl)ENSG00000176624
Phylogenetic Trees/Animal Genes : TreeFamMEX3C
HOVERGENQ5U5Q3
HOGENOMQ5U5Q3
Homologs : HomoloGeneMEX3C
Homology/Alignments : Family Browser (UCSC)MEX3C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMEX3C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MEX3C
dbVarMEX3C
ClinVarMEX3C
1000_GenomesMEX3C 
Exome Variant ServerMEX3C
ExAC (Exome Aggregation Consortium)MEX3C (select the gene name)
Genetic variants : HAPMAP51320
Genomic Variants (DGV)MEX3C [DGVbeta]
DECIPHERMEX3C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMEX3C 
Mutations
ICGC Data PortalMEX3C 
TCGA Data PortalMEX3C 
Broad Tumor PortalMEX3C
OASIS PortalMEX3C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMEX3C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMEX3C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MEX3C
DgiDB (Drug Gene Interaction Database)MEX3C
DoCM (Curated mutations)MEX3C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MEX3C (select a term)
intoGenMEX3C
Cancer3DMEX3C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611005   
Orphanet
MedgenMEX3C
Genetic Testing Registry MEX3C
NextProtQ5U5Q3 [Medical]
TSGene51320
GENETestsMEX3C
Target ValidationMEX3C
Huge Navigator MEX3C [HugePedia]
snp3D : Map Gene to Disease51320
BioCentury BCIQMEX3C
ClinGenMEX3C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51320
Chemical/Pharm GKB GenePA162395821
Clinical trialMEX3C
Miscellaneous
canSAR (ICR)MEX3C (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMEX3C
EVEXMEX3C
GoPubMedMEX3C
iHOPMEX3C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:06:40 CEST 2017

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