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MFAP2 (microfibrillar-associated protein 2)

Identity

Other namesMAGP
MAGP-1
MAGP1
HGNC (Hugo) MFAP2
LocusID (NCBI) 4237
Location 1p36.13
Location_base_pair Starts at 17300999 and ends at 17308081 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MFAP2   7033
Entrez_Gene (NCBI)MFAP2  4237  microfibrillar-associated protein 2
Cards
GeneCards (Weizmann)MFAP2
Ensembl (Hinxton)ENSG00000117122 [Gene_View]  chr1:17300999-17308081 [Contig_View]  MFAP2 [Vega]
AceView (NCBI)MFAP2
Genatlas (Paris)MFAP2
SOURCE (Stanford)NM_001135247 NM_001135248 NM_002403 NM_017459
Genomic and cartography
GoldenPath (UCSC)MFAP2  -  1p36.13   chr1:17300999-17308081 -  1p36.13   [Description]    (hg19-Feb_2009)
EnsemblMFAP2 - 1p36.13 [CytoView]
Mapping of homologs : NCBIMFAP2 [Mapview]
OMIM156790   
Gene and transcription
Genbank (Entrez)AK222751 AK301655 AU280150 BC015039 BC028033
RefSeq transcript (SRS)NM_001135247 NM_001135248 NM_002403 NM_017459
RefSeq transcript (Entrez)NM_001135247 NM_001135248 NM_002403 NM_017459
RefSeq genomic (SRS)AC_000133 NC_000001 NC_018912 NG_029688 NT_004610 NW_001838572 NW_004077990
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NG_029688 NT_004610 NW_001838572 NW_004077990
Consensus coding sequences : CCDS (NCBI)MFAP2
Cluster EST : UnigeneHs.389137 [ SRS ] Hs.389137 [ NCBI ]
CGAP (NCI)Hs.389137
Alternative Splicing : Fast-db (Paris)GSHG0001794
Alternative Splicing GalleryENSG00000117122
Gene ExpressionMFAP2 [ NCBI-GEO ]   MFAP2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP55001 (SRS) P55001 (Uniprot)
NextProtP55001
With graphics : InterProP55001
Splice isoforms : SwissVarP55001(Swissvar)
Domains : Interpro (SRS)MAGP    ShK_toxin   
Domains : Interpro (EBI)MAGP    ShK_toxin   
Related proteins : CluSTrP55001
Domain families : Pfam (SRS)MAGP (PF05507)    ShK (PF01549)   
Domain families : Pfam (Sanger)MAGP (PF05507)    ShK (PF01549)   
Domain families : Pfam (NCBI)pfam05507    pfam01549   
DMDM4237
Blocks (Seattle)P55001
Human Protein AtlasENSG00000117122
HPRD01137
IPIIPI00022621   IPI00644827   
Protein Interaction databases
DIP (DOE-UCLA)P55001
IntAct (EBI)P55001
FunCoupENSG00000117122
REACTOMEMFAP2
Protein Interaction Database4237
BioGRIDMFAP2
InParanoidP55001
Interologous Interaction database P55001
IntegromeDBMFAP2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MFAP2
SNP (GeneSNP Utah)MFAP2
SNP : HGBaseMFAP2
Genetic variants : HAPMAPMFAP2
Somatic Mutations in Cancer : COSMICMFAP2 
CONAN: Copy Number AnalysisMFAP2 
Mutations and Diseases : HGMDMFAP2
OMIM156790   
GENETests156790   
Disease Genetic AssociationMFAP2
Huge Navigator MFAP2 [HugePedia]  MFAP2 [HugeCancerGEM]
Genomic VariantsMFAP2  MFAP2 [DGVbeta]
ClinVarMFAP2
snp3D : Map Gene to Disease4237
General knowledge
Homologs : HomoloGeneMFAP2
Homology/Alignments : Family Browser (UCSC)MFAP2
Phylogenetic Trees/Animal Genes : TreeFamMFAP2
Chemical/Protein Interactions : CTD4237
Chemical/Pharm GKB GenePA30769
Clinical trialMFAP2
Cancer Resource (Charite)ENSG00000117122
Ontology : AmiGOmicrofibril  fibronectin binding  extracellular region  extracellular matrix organization  platelet formation  fibrinogen binding  
Ontology : EGO-EBImicrofibril  fibronectin binding  extracellular region  extracellular matrix organization  platelet formation  fibrinogen binding  
Other databases
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
PubGeneMFAP2
iHOPMFAP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:48:05 CEST 2013
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