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MFNG (MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase)

Identity

Alias_namesmanic fringe (Drosophila) homolog
manic fringe homolog (Drosophila)
Other alias-
HGNC (Hugo) MFNG
LocusID (NCBI) 4242
Atlas_Id 41346
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 37469063 and ends at 37486387 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFNG   7038
Cards
Entrez_Gene (NCBI)MFNG  4242  MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Aliases
GeneCards (Weizmann)MFNG
Ensembl hg19 (Hinxton)ENSG00000100060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100060 [Gene_View]  chr22:37469063-37486387 [Contig_View]  MFNG [Vega]
ICGC DataPortalENSG00000100060
TCGA cBioPortalMFNG
AceView (NCBI)MFNG
Genatlas (Paris)MFNG
WikiGenes4242
SOURCE (Princeton)MFNG
Genetics Home Reference (NIH)MFNG
Genomic and cartography
GoldenPath hg38 (UCSC)MFNG  -     chr22:37469063-37486387 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFNG  -     22q13.1   [Description]    (hg19-Feb_2009)
EnsemblMFNG - 22q13.1 [CytoView hg19]  MFNG - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBIMFNG [Mapview hg19]  MFNG [Mapview hg38]
OMIM602577   
Gene and transcription
Genbank (Entrez)AI363008 AK292123 AK297149 AK297833 AK316555
RefSeq transcript (Entrez)NM_001166343 NM_002405
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFNG
Cluster EST : UnigeneHs.517603 [ NCBI ]
CGAP (NCI)Hs.517603
Alternative Splicing GalleryENSG00000100060
Gene ExpressionMFNG [ NCBI-GEO ]   MFNG [ EBI - ARRAY_EXPRESS ]   MFNG [ SEEK ]   MFNG [ MEM ]
Gene Expression Viewer (FireBrowse)MFNG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4242
GTEX Portal (Tissue expression)MFNG
Protein : pattern, domain, 3D structure
UniProt/SwissProtO00587   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO00587  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO00587
Splice isoforms : SwissVarO00587
Catalytic activity : Enzyme2.4.1.222 [ Enzyme-Expasy ]   2.4.1.2222.4.1.222 [ IntEnz-EBI ]   2.4.1.222 [ BRENDA ]   2.4.1.222 [ KEGG ]   
PhosPhoSitePlusO00587
Domains : Interpro (EBI)Fringe    Fringe-like   
Domain families : Pfam (Sanger)Fringe (PF02434)   
Domain families : Pfam (NCBI)pfam02434   
Conserved Domain (NCBI)MFNG
DMDM Disease mutations4242
Blocks (Seattle)MFNG
SuperfamilyO00587
Human Protein AtlasENSG00000100060
Peptide AtlasO00587
HPRD03988
IPIIPI00025339   IPI00796367   IPI00798181   IPI00879472   IPI00879651   IPI00879820   IPI00880076   IPI00877613   
Protein Interaction databases
DIP (DOE-UCLA)O00587
IntAct (EBI)O00587
FunCoupENSG00000100060
BioGRIDMFNG
STRING (EMBL)MFNG
ZODIACMFNG
Ontologies - Pathways
QuickGOO00587
Ontology : AmiGOmarginal zone B cell differentiation  extracellular space  pattern specification process  integral component of Golgi membrane  positive regulation of protein binding  O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity  positive regulation of Notch signaling pathway  metal ion binding  
Ontology : EGO-EBImarginal zone B cell differentiation  extracellular space  pattern specification process  integral component of Golgi membrane  positive regulation of protein binding  O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity  positive regulation of Notch signaling pathway  metal ion binding  
Pathways : KEGGOther types of O-glycan biosynthesis    Notch signaling pathway   
NDEx NetworkMFNG
Atlas of Cancer Signalling NetworkMFNG
Wikipedia pathwaysMFNG
Orthology - Evolution
OrthoDB4242
GeneTree (enSembl)ENSG00000100060
Phylogenetic Trees/Animal Genes : TreeFamMFNG
HOVERGENO00587
HOGENOMO00587
Homologs : HomoloGeneMFNG
Homology/Alignments : Family Browser (UCSC)MFNG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFNG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFNG
dbVarMFNG
ClinVarMFNG
1000_GenomesMFNG 
Exome Variant ServerMFNG
ExAC (Exome Aggregation Consortium)MFNG (select the gene name)
Genetic variants : HAPMAP4242
Genomic Variants (DGV)MFNG [DGVbeta]
DECIPHERMFNG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFNG 
Mutations
ICGC Data PortalMFNG 
TCGA Data PortalMFNG 
Broad Tumor PortalMFNG
OASIS PortalMFNG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFNG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMFNG
intOGen PortalMFNG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MFNG
DgiDB (Drug Gene Interaction Database)MFNG
DoCM (Curated mutations)MFNG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFNG (select a term)
intoGenMFNG
Cancer3DMFNG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602577   
Orphanet
MedgenMFNG
Genetic Testing Registry MFNG
NextProtO00587 [Medical]
TSGene4242
GENETestsMFNG
Target ValidationMFNG
Huge Navigator MFNG [HugePedia]
snp3D : Map Gene to Disease4242
BioCentury BCIQMFNG
ClinGenMFNG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4242
Chemical/Pharm GKB GenePA30775
Clinical trialMFNG
Miscellaneous
canSAR (ICR)MFNG (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFNG
EVEXMFNG
GoPubMedMFNG
iHOPMFNG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:17:53 CEST 2017

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