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MFSD11 (major facilitator superfamily domain containing 11)

Identity

Alias_symbol (synonym)FLJ22196
FLJ20226
Other aliasET
HGNC (Hugo) MFSD11
LocusID (NCBI) 79157
Atlas_Id 68938
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 76737501 and ends at 76779254 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
METTL23 (17q25.1) / MFSD11 (17q25.1)MFSD11 (17q25.1) / NR2C2 (3p25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD11   25458
Cards
Entrez_Gene (NCBI)MFSD11  79157  major facilitator superfamily domain containing 11
AliasesET
GeneCards (Weizmann)MFSD11
Ensembl hg19 (Hinxton)ENSG00000092931 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000092931 [Gene_View]  chr17:76737501-76779254 [Contig_View]  MFSD11 [Vega]
ICGC DataPortalENSG00000092931
TCGA cBioPortalMFSD11
AceView (NCBI)MFSD11
Genatlas (Paris)MFSD11
WikiGenes79157
SOURCE (Princeton)MFSD11
Genetics Home Reference (NIH)MFSD11
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD11  -     chr17:76737501-76779254 +  17q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD11  -     17q25.1   [Description]    (hg19-Feb_2009)
EnsemblMFSD11 - 17q25.1 [CytoView hg19]  MFSD11 - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBIMFSD11 [Mapview hg19]  MFSD11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF015183 AF015184 AF015185 AF015186 AF015187
RefSeq transcript (Entrez)NM_001242532 NM_001242533 NM_001242534 NM_001242535 NM_001242536 NM_001242537 NM_024311
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFSD11
Cluster EST : UnigeneHs.732019 [ NCBI ]
CGAP (NCI)Hs.732019
Alternative Splicing GalleryENSG00000092931
Gene ExpressionMFSD11 [ NCBI-GEO ]   MFSD11 [ EBI - ARRAY_EXPRESS ]   MFSD11 [ SEEK ]   MFSD11 [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79157
GTEX Portal (Tissue expression)MFSD11
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43934   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43934  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43934
Splice isoforms : SwissVarO43934
PhosPhoSitePlusO43934
Domains : Interpro (EBI)Ion_channel_UNC-93    MFS_dom   
Domain families : Pfam (Sanger)UNC-93 (PF05978)   
Domain families : Pfam (NCBI)pfam05978   
Conserved Domain (NCBI)MFSD11
DMDM Disease mutations79157
Blocks (Seattle)MFSD11
SuperfamilyO43934
Human Protein AtlasENSG00000092931
Peptide AtlasO43934
HPRD13281
IPIIPI00382389   IPI00010329   
Protein Interaction databases
DIP (DOE-UCLA)O43934
IntAct (EBI)O43934
FunCoupENSG00000092931
BioGRIDMFSD11
STRING (EMBL)MFSD11
ZODIACMFSD11
Ontologies - Pathways
QuickGOO43934
Ontology : AmiGOmolecular_function  cellular_component  biological_process  integral component of membrane  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  integral component of membrane  
NDEx NetworkMFSD11
Atlas of Cancer Signalling NetworkMFSD11
Wikipedia pathwaysMFSD11
Orthology - Evolution
OrthoDB79157
GeneTree (enSembl)ENSG00000092931
Phylogenetic Trees/Animal Genes : TreeFamMFSD11
HOVERGENO43934
HOGENOMO43934
Homologs : HomoloGeneMFSD11
Homology/Alignments : Family Browser (UCSC)MFSD11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD11
dbVarMFSD11
ClinVarMFSD11
1000_GenomesMFSD11 
Exome Variant ServerMFSD11
ExAC (Exome Aggregation Consortium)MFSD11 (select the gene name)
Genetic variants : HAPMAP79157
Genomic Variants (DGV)MFSD11 [DGVbeta]
DECIPHERMFSD11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD11 
Mutations
ICGC Data PortalMFSD11 
TCGA Data PortalMFSD11 
Broad Tumor PortalMFSD11
OASIS PortalMFSD11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFSD11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMFSD11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MFSD11
DgiDB (Drug Gene Interaction Database)MFSD11
DoCM (Curated mutations)MFSD11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD11 (select a term)
intoGenMFSD11
Cancer3DMFSD11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMFSD11
Genetic Testing Registry MFSD11
NextProtO43934 [Medical]
TSGene79157
GENETestsMFSD11
Huge Navigator MFSD11 [HugePedia]
snp3D : Map Gene to Disease79157
BioCentury BCIQMFSD11
ClinGenMFSD11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79157
Chemical/Pharm GKB GenePA162395841
Clinical trialMFSD11
Miscellaneous
canSAR (ICR)MFSD11 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD11
EVEXMFSD11
GoPubMedMFSD11
iHOPMFSD11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:38:17 CEST 2017

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