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MFSD14A (major facilitator superfamily domain containing 14A)

Identity

Alias_namesHIAT1
hippocampus abundant transcript 1
Alias_symbol (synonym)DKFZP564L0864
Other alias
HGNC (Hugo) MFSD14A
LocusID (NCBI) 64645
Atlas_Id 77919
Location 1p21.2  [Link to chromosome band 1p21]
Location_base_pair Starts at 100038233 and ends at 100083373 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EIF4G2 (11p15.3) / MFSD14A (1p21.2)MFSD14A (1p21.2) / CNTNAP2 (7q35)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD14A   23363
Cards
Entrez_Gene (NCBI)MFSD14A  64645  major facilitator superfamily domain containing 14A
AliasesHIAT1
GeneCards (Weizmann)MFSD14A
Ensembl hg19 (Hinxton)ENSG00000156875 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156875 [Gene_View]  chr1:100038233-100083373 [Contig_View]  MFSD14A [Vega]
ICGC DataPortalENSG00000156875
TCGA cBioPortalMFSD14A
AceView (NCBI)MFSD14A
Genatlas (Paris)MFSD14A
WikiGenes64645
SOURCE (Princeton)MFSD14A
Genetics Home Reference (NIH)MFSD14A
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD14A  -     chr1:100038233-100083373 +  1p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD14A  -     1p21.2   [Description]    (hg19-Feb_2009)
EnsemblMFSD14A - 1p21.2 [CytoView hg19]  MFSD14A - 1p21.2 [CytoView hg38]
Mapping of homologs : NCBIMFSD14A [Mapview hg19]  MFSD14A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF427492 AK057172 AK075208 AK096669 AK127671
RefSeq transcript (Entrez)NM_033055
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFSD14A
Cluster EST : UnigeneHs.124156 [ NCBI ]
CGAP (NCI)Hs.124156
Alternative Splicing GalleryENSG00000156875
Gene ExpressionMFSD14A [ NCBI-GEO ]   MFSD14A [ EBI - ARRAY_EXPRESS ]   MFSD14A [ SEEK ]   MFSD14A [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD14A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64645
GTEX Portal (Tissue expression)MFSD14A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96MC6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96MC6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96MC6
Splice isoforms : SwissVarQ96MC6
PhosPhoSitePlusQ96MC6
Domaine pattern : Prosite (Expaxy)MFS (PS50850)    SUGAR_TRANSPORT_1 (PS00216)   
Domains : Interpro (EBI)MFS    MFS_dom    Sugar_transporter_CS    Tet-R_TetA/multi-R_MdtG   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)MFSD14A
DMDM Disease mutations64645
Blocks (Seattle)MFSD14A
SuperfamilyQ96MC6
Human Protein AtlasENSG00000156875
Peptide AtlasQ96MC6
HPRD11022
IPIIPI00307656   IPI00647550   
Protein Interaction databases
DIP (DOE-UCLA)Q96MC6
IntAct (EBI)Q96MC6
FunCoupENSG00000156875
BioGRIDMFSD14A
STRING (EMBL)MFSD14A
ZODIACMFSD14A
Ontologies - Pathways
QuickGOQ96MC6
Ontology : AmiGOtransporter activity  integral component of membrane  transmembrane transport  
Ontology : EGO-EBItransporter activity  integral component of membrane  transmembrane transport  
NDEx NetworkMFSD14A
Atlas of Cancer Signalling NetworkMFSD14A
Wikipedia pathwaysMFSD14A
Orthology - Evolution
OrthoDB64645
GeneTree (enSembl)ENSG00000156875
Phylogenetic Trees/Animal Genes : TreeFamMFSD14A
HOVERGENQ96MC6
HOGENOMQ96MC6
Homologs : HomoloGeneMFSD14A
Homology/Alignments : Family Browser (UCSC)MFSD14A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD14A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD14A
dbVarMFSD14A
ClinVarMFSD14A
1000_GenomesMFSD14A 
Exome Variant ServerMFSD14A
ExAC (Exome Aggregation Consortium)MFSD14A (select the gene name)
Genetic variants : HAPMAP64645
Genomic Variants (DGV)MFSD14A [DGVbeta]
DECIPHERMFSD14A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD14A 
Mutations
ICGC Data PortalMFSD14A 
TCGA Data PortalMFSD14A 
Broad Tumor PortalMFSD14A
OASIS PortalMFSD14A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMFSD14A
BioMutasearch MFSD14A
DgiDB (Drug Gene Interaction Database)MFSD14A
DoCM (Curated mutations)MFSD14A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD14A (select a term)
intoGenMFSD14A
Cancer3DMFSD14A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMFSD14A
Genetic Testing Registry MFSD14A
NextProtQ96MC6 [Medical]
TSGene64645
GENETestsMFSD14A
Target ValidationMFSD14A
Huge Navigator MFSD14A [HugePedia]
snp3D : Map Gene to Disease64645
BioCentury BCIQMFSD14A
ClinGenMFSD14A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64645
Chemical/Pharm GKB GenePA134910737
Clinical trialMFSD14A
Miscellaneous
canSAR (ICR)MFSD14A (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD14A
EVEXMFSD14A
GoPubMedMFSD14A
iHOPMFSD14A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:27:16 CEST 2017

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