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MFSD14B (major facilitator superfamily domain containing 14B)

Identity

Other aliasHIATL1
HGNC (Hugo) MFSD14B
LocusID (NCBI) 84641
Atlas_Id 56921
Location 9q22.32  [Link to chromosome band 9q22]
Location_base_pair Starts at 94374551 and ends at 94460920 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MFSD14B (9q22.32) / MFSD14B (9q22.32)MFSD14B (9q22.32) / SF3B1 (2q33.1)MFSD14B (9q22.32) / SH3GLB1 (1p22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD14B   23376
Cards
Entrez_Gene (NCBI)MFSD14B  84641  major facilitator superfamily domain containing 14B
AliasesHIATL1
GeneCards (Weizmann)MFSD14B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:94374551-94460920 [Contig_View]  MFSD14B [Vega]
TCGA cBioPortalMFSD14B
AceView (NCBI)MFSD14B
Genatlas (Paris)MFSD14B
WikiGenes84641
SOURCE (Princeton)MFSD14B
Genetics Home Reference (NIH)MFSD14B
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD14B  -     chr9:94374551-94460920 +  9q22.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD14B  -     9q22.32   [Description]    (hg19-Feb_2009)
EnsemblMFSD14B - 9q22.32 [CytoView hg19]  MFSD14B - 9q22.32 [CytoView hg38]
Mapping of homologs : NCBIMFSD14B [Mapview hg19]  MFSD14B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF255650 AK027659 AK222836 AK300615 AL832415
RefSeq transcript (Entrez)NM_032558
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFSD14B
Cluster EST : UnigeneHs.555996 [ NCBI ]
CGAP (NCI)Hs.555996
Gene ExpressionMFSD14B [ NCBI-GEO ]   MFSD14B [ EBI - ARRAY_EXPRESS ]   MFSD14B [ SEEK ]   MFSD14B [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD14B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84641
GTEX Portal (Tissue expression)MFSD14B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5SR56   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5SR56  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5SR56
Splice isoforms : SwissVarQ5SR56
PhosPhoSitePlusQ5SR56
Domaine pattern : Prosite (Expaxy)MFS (PS50850)    SUGAR_TRANSPORT_1 (PS00216)   
Domains : Interpro (EBI)MFS    MFS_dom    Sugar_transporter_CS    Tet-R_TetA/multi-R_MdtG   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)MFSD14B
DMDM Disease mutations84641
Blocks (Seattle)MFSD14B
SuperfamilyQ5SR56
Peptide AtlasQ5SR56
IPIIPI00291042   IPI00909664   IPI00385869   
Protein Interaction databases
DIP (DOE-UCLA)Q5SR56
IntAct (EBI)Q5SR56
BioGRIDMFSD14B
STRING (EMBL)MFSD14B
ZODIACMFSD14B
Ontologies - Pathways
QuickGOQ5SR56
Ontology : AmiGOtransporter activity  integral component of membrane  transmembrane transport  
Ontology : EGO-EBItransporter activity  integral component of membrane  transmembrane transport  
NDEx NetworkMFSD14B
Atlas of Cancer Signalling NetworkMFSD14B
Wikipedia pathwaysMFSD14B
Orthology - Evolution
OrthoDB84641
Phylogenetic Trees/Animal Genes : TreeFamMFSD14B
HOVERGENQ5SR56
HOGENOMQ5SR56
Homologs : HomoloGeneMFSD14B
Homology/Alignments : Family Browser (UCSC)MFSD14B
Gene fusions - Rearrangements
Fusion: Tumor Portal MFSD14B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD14B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD14B
dbVarMFSD14B
ClinVarMFSD14B
1000_GenomesMFSD14B 
Exome Variant ServerMFSD14B
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP84641
Genomic Variants (DGV)MFSD14B [DGVbeta]
DECIPHERMFSD14B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD14B 
Mutations
ICGC Data PortalMFSD14B 
TCGA Data PortalMFSD14B 
Broad Tumor PortalMFSD14B
OASIS PortalMFSD14B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMFSD14B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MFSD14B
DgiDB (Drug Gene Interaction Database)MFSD14B
DoCM (Curated mutations)MFSD14B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD14B (select a term)
intoGenMFSD14B
Cancer3DMFSD14B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMFSD14B
Genetic Testing Registry MFSD14B
NextProtQ5SR56 [Medical]
TSGene84641
GENETestsMFSD14B
Target ValidationMFSD14B
Huge Navigator MFSD14B [HugePedia]
snp3D : Map Gene to Disease84641
BioCentury BCIQMFSD14B
ClinGenMFSD14B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84641
Chemical/Pharm GKB GenePA142671691
Clinical trialMFSD14B
Miscellaneous
canSAR (ICR)MFSD14B (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD14B
EVEXMFSD14B
GoPubMedMFSD14B
iHOPMFSD14B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:58:39 CET 2017

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