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MFSD14C (major facilitator superfamily domain containing 14C)

Identity

Alias (NCBI)HIATL2
HGNC (Hugo) MFSD14C
HGNC Alias symbMGC12945
HGNC Previous nameHIATL2
HGNC Previous namehippocampus abundant transcript-like 2
LocusID (NCBI) 84278
Atlas_Id 77921
Location 9q22.33  [Link to chromosome band 9q22]
Location_base_pair Starts at 96942913 and ends at 97013682 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD14C   23672
Cards
Entrez_Gene (NCBI)MFSD14C  84278  major facilitator superfamily domain containing 14C
AliasesHIATL2
GeneCards (Weizmann)MFSD14C
Ensembl hg19 (Hinxton)ENSG00000196312 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196312 [Gene_View]  ENSG00000196312 [Sequence]  chr9:96942913-97013682 [Contig_View]  MFSD14C [Vega]
ICGC DataPortalENSG00000196312
TCGA cBioPortalMFSD14C
AceView (NCBI)MFSD14C
Genatlas (Paris)MFSD14C
WikiGenes84278
SOURCE (Princeton)MFSD14C
Genetics Home Reference (NIH)MFSD14C
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD14C  -     chr9:96942913-97013682 -  9q22.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD14C  -     9q22.33   [Description]    (hg19-Feb_2009)
GoldenPathMFSD14C - 9q22.33 [CytoView hg19]  MFSD14C - 9q22.33 [CytoView hg38]
ImmunoBaseENSG00000196312
genome Data Viewer NCBIMFSD14C [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK127385 BC005058 BM991661 CX166536
RefSeq transcript (Entrez)NM_001355228 NM_001355229 NM_001355230
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFSD14C
Alternative Splicing GalleryENSG00000196312
Gene ExpressionMFSD14C [ NCBI-GEO ]   MFSD14C [ EBI - ARRAY_EXPRESS ]   MFSD14C [ SEEK ]   MFSD14C [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD14C [ Firebrowse - Broad ]
GenevisibleExpression of MFSD14C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84278
GTEX Portal (Tissue expression)MFSD14C
Human Protein AtlasENSG00000196312-MFSD14C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VZR4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VZR4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VZR4
Splice isoforms : SwissVarQ5VZR4
PhosPhoSitePlusQ5VZR4
Domaine pattern : Prosite (Expaxy)MFS (PS50850)    SUGAR_TRANSPORT_1 (PS00216)   
Domains : Interpro (EBI)MFS_dom    MFS_trans_sf    Sugar_transporter_CS   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MFSD14C
DMDM Disease mutations84278
Blocks (Seattle)MFSD14C
SuperfamilyQ5VZR4
Human Protein Atlas [tissue]ENSG00000196312-MFSD14C [tissue]
Peptide AtlasQ5VZR4
HPRD17102
IPIIPI00031137   
Protein Interaction databases
DIP (DOE-UCLA)Q5VZR4
IntAct (EBI)Q5VZR4
FunCoupENSG00000196312
BioGRIDMFSD14C
STRING (EMBL)MFSD14C
ZODIACMFSD14C
Ontologies - Pathways
QuickGOQ5VZR4
Ontology : AmiGOintegral component of membrane  transmembrane transporter activity  transmembrane transport  
Ontology : EGO-EBIintegral component of membrane  transmembrane transporter activity  transmembrane transport  
NDEx NetworkMFSD14C
Atlas of Cancer Signalling NetworkMFSD14C
Wikipedia pathwaysMFSD14C
Orthology - Evolution
OrthoDB84278
GeneTree (enSembl)ENSG00000196312
Phylogenetic Trees/Animal Genes : TreeFamMFSD14C
HOGENOMQ5VZR4
Homologs : HomoloGeneMFSD14C
Homology/Alignments : Family Browser (UCSC)MFSD14C
Gene fusions - Rearrangements
Fusion : QuiverMFSD14C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD14C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD14C
dbVarMFSD14C
ClinVarMFSD14C
1000_GenomesMFSD14C 
Exome Variant ServerMFSD14C
GNOMAD BrowserENSG00000196312
Varsome BrowserMFSD14C
Genetic variants : HAPMAP84278
Genomic Variants (DGV)MFSD14C [DGVbeta]
DECIPHERMFSD14C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD14C 
Mutations
ICGC Data PortalMFSD14C 
TCGA Data PortalMFSD14C 
Broad Tumor PortalMFSD14C
OASIS PortalMFSD14C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFSD14C  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMFSD14C
Mutations and Diseases : HGMDMFSD14C
BioMutasearch MFSD14C
DgiDB (Drug Gene Interaction Database)MFSD14C
DoCM (Curated mutations)MFSD14C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD14C (select a term)
intoGenMFSD14C
Cancer3DMFSD14C(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMFSD14C
MedgenMFSD14C
Genetic Testing Registry MFSD14C
NextProtQ5VZR4 [Medical]
TSGene84278
GENETestsMFSD14C
Target ValidationMFSD14C
Huge Navigator MFSD14C [HugePedia]
snp3D : Map Gene to Disease84278
BioCentury BCIQMFSD14C
ClinGenMFSD14C
Clinical trials, drugs, therapy
Protein Interactions : CTD84278
Pharm GKB GenePA134993447
Clinical trialMFSD14C
Miscellaneous
canSAR (ICR)MFSD14C (select the gene name)
HarmonizomeMFSD14C
DataMed IndexMFSD14C
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD14C
EVEXMFSD14C
GoPubMedMFSD14C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:24:43 CEST 2020

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