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MFSD2B (major facilitator superfamily domain containing 2B)

Identity

Other alias-
HGNC (Hugo) MFSD2B
LocusID (NCBI) 388931
Atlas_Id 68940
Location 2p23.3  [Link to chromosome band 2p23]
Location_base_pair Starts at 24010087 and ends at 24026775 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD2B   37207
Cards
Entrez_Gene (NCBI)MFSD2B  388931  major facilitator superfamily domain containing 2B
Aliases
GeneCards (Weizmann)MFSD2B
Ensembl hg19 (Hinxton)ENSG00000205639 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205639 [Gene_View]  chr2:24010087-24026775 [Contig_View]  MFSD2B [Vega]
ICGC DataPortalENSG00000205639
TCGA cBioPortalMFSD2B
AceView (NCBI)MFSD2B
Genatlas (Paris)MFSD2B
WikiGenes388931
SOURCE (Princeton)MFSD2B
Genetics Home Reference (NIH)MFSD2B
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD2B  -     chr2:24010087-24026775 +  2p23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD2B  -     2p23.3   [Description]    (hg19-Feb_2009)
EnsemblMFSD2B - 2p23.3 [CytoView hg19]  MFSD2B - 2p23.3 [CytoView hg38]
Mapping of homologs : NCBIMFSD2B [Mapview hg19]  MFSD2B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC033385 BX357394 BX369190 BX647146 CX751215
RefSeq transcript (Entrez)NM_001080473 NM_001346880
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFSD2B
Cluster EST : UnigeneHs.407482 [ NCBI ]
CGAP (NCI)Hs.407482
Alternative Splicing GalleryENSG00000205639
Gene ExpressionMFSD2B [ NCBI-GEO ]   MFSD2B [ EBI - ARRAY_EXPRESS ]   MFSD2B [ SEEK ]   MFSD2B [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD2B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388931
GTEX Portal (Tissue expression)MFSD2B
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NFX1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NFX1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NFX1
Splice isoforms : SwissVarA6NFX1
PhosPhoSitePlusA6NFX1
Domains : Interpro (EBI)MFS_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MFSD2B
DMDM Disease mutations388931
Blocks (Seattle)MFSD2B
SuperfamilyA6NFX1
Human Protein AtlasENSG00000205639
Peptide AtlasA6NFX1
IPIIPI00397876   IPI00936959   IPI00893497   
Protein Interaction databases
DIP (DOE-UCLA)A6NFX1
IntAct (EBI)A6NFX1
FunCoupENSG00000205639
BioGRIDMFSD2B
STRING (EMBL)MFSD2B
ZODIACMFSD2B
Ontologies - Pathways
QuickGOA6NFX1
Ontology : AmiGOtransport  integral component of membrane  
Ontology : EGO-EBItransport  integral component of membrane  
NDEx NetworkMFSD2B
Atlas of Cancer Signalling NetworkMFSD2B
Wikipedia pathwaysMFSD2B
Orthology - Evolution
OrthoDB388931
GeneTree (enSembl)ENSG00000205639
Phylogenetic Trees/Animal Genes : TreeFamMFSD2B
HOVERGENA6NFX1
HOGENOMA6NFX1
Homologs : HomoloGeneMFSD2B
Homology/Alignments : Family Browser (UCSC)MFSD2B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD2B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD2B
dbVarMFSD2B
ClinVarMFSD2B
1000_GenomesMFSD2B 
Exome Variant ServerMFSD2B
ExAC (Exome Aggregation Consortium)MFSD2B (select the gene name)
Genetic variants : HAPMAP388931
Genomic Variants (DGV)MFSD2B [DGVbeta]
DECIPHERMFSD2B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD2B 
Mutations
ICGC Data PortalMFSD2B 
TCGA Data PortalMFSD2B 
Broad Tumor PortalMFSD2B
OASIS PortalMFSD2B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFSD2B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMFSD2B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MFSD2B
DgiDB (Drug Gene Interaction Database)MFSD2B
DoCM (Curated mutations)MFSD2B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD2B (select a term)
intoGenMFSD2B
Cancer3DMFSD2B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMFSD2B
Genetic Testing Registry MFSD2B
NextProtA6NFX1 [Medical]
TSGene388931
GENETestsMFSD2B
Target ValidationMFSD2B
Huge Navigator MFSD2B [HugePedia]
snp3D : Map Gene to Disease388931
BioCentury BCIQMFSD2B
ClinGenMFSD2B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388931
Chemical/Pharm GKB GenePA165696804
Clinical trialMFSD2B
Miscellaneous
canSAR (ICR)MFSD2B (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD2B
EVEXMFSD2B
GoPubMedMFSD2B
iHOPMFSD2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:26:00 CEST 2017

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