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MFSD3 (major facilitator superfamily domain containing 3)

Identity

Other alias-
HGNC (Hugo) MFSD3
LocusID (NCBI) 113655
Atlas_Id 68941
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 144509036 and ends at 144511228 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MFSD3 (8q24.3) / LRRC14 (8q24.3)MFSD3 (8q24.3) / MFSD3 (8q24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD3   25157
Cards
Entrez_Gene (NCBI)MFSD3  113655  major facilitator superfamily domain containing 3
Aliases
GeneCards (Weizmann)MFSD3
Ensembl hg19 (Hinxton)ENSG00000167700 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167700 [Gene_View]  chr8:144509036-144511228 [Contig_View]  MFSD3 [Vega]
ICGC DataPortalENSG00000167700
TCGA cBioPortalMFSD3
AceView (NCBI)MFSD3
Genatlas (Paris)MFSD3
WikiGenes113655
SOURCE (Princeton)MFSD3
Genetics Home Reference (NIH)MFSD3
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD3  -     chr8:144509036-144511228 +  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD3  -     8q24.3   [Description]    (hg19-Feb_2009)
EnsemblMFSD3 - 8q24.3 [CytoView hg19]  MFSD3 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBIMFSD3 [Mapview hg19]  MFSD3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC011982 BF688676 DB455059 DB520468
RefSeq transcript (Entrez)NM_138431
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFSD3
Cluster EST : UnigeneHs.7678 [ NCBI ]
CGAP (NCI)Hs.7678
Alternative Splicing GalleryENSG00000167700
Gene ExpressionMFSD3 [ NCBI-GEO ]   MFSD3 [ EBI - ARRAY_EXPRESS ]   MFSD3 [ SEEK ]   MFSD3 [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)113655
GTEX Portal (Tissue expression)MFSD3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96ES6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96ES6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96ES6
Splice isoforms : SwissVarQ96ES6
PhosPhoSitePlusQ96ES6
Domains : Interpro (EBI)MFS    MFS_dom   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)MFSD3
DMDM Disease mutations113655
Blocks (Seattle)MFSD3
SuperfamilyQ96ES6
Human Protein AtlasENSG00000167700
Peptide AtlasQ96ES6
HPRD14003
IPIIPI00061678   
Protein Interaction databases
DIP (DOE-UCLA)Q96ES6
IntAct (EBI)Q96ES6
FunCoupENSG00000167700
BioGRIDMFSD3
STRING (EMBL)MFSD3
ZODIACMFSD3
Ontologies - Pathways
QuickGOQ96ES6
Ontology : AmiGOintegral component of plasma membrane  transport  solute:proton symporter activity  proton transport  transmembrane transport  
Ontology : EGO-EBIintegral component of plasma membrane  transport  solute:proton symporter activity  proton transport  transmembrane transport  
NDEx NetworkMFSD3
Atlas of Cancer Signalling NetworkMFSD3
Wikipedia pathwaysMFSD3
Orthology - Evolution
OrthoDB113655
GeneTree (enSembl)ENSG00000167700
Phylogenetic Trees/Animal Genes : TreeFamMFSD3
HOVERGENQ96ES6
HOGENOMQ96ES6
Homologs : HomoloGeneMFSD3
Homology/Alignments : Family Browser (UCSC)MFSD3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD3
dbVarMFSD3
ClinVarMFSD3
1000_GenomesMFSD3 
Exome Variant ServerMFSD3
ExAC (Exome Aggregation Consortium)MFSD3 (select the gene name)
Genetic variants : HAPMAP113655
Genomic Variants (DGV)MFSD3 [DGVbeta]
DECIPHERMFSD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD3 
Mutations
ICGC Data PortalMFSD3 
TCGA Data PortalMFSD3 
Broad Tumor PortalMFSD3
OASIS PortalMFSD3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFSD3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMFSD3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MFSD3
DgiDB (Drug Gene Interaction Database)MFSD3
DoCM (Curated mutations)MFSD3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD3 (select a term)
intoGenMFSD3
Cancer3DMFSD3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMFSD3
Genetic Testing Registry MFSD3
NextProtQ96ES6 [Medical]
TSGene113655
GENETestsMFSD3
Target ValidationMFSD3
Huge Navigator MFSD3 [HugePedia]
snp3D : Map Gene to Disease113655
BioCentury BCIQMFSD3
ClinGenMFSD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD113655
Chemical/Pharm GKB GenePA142671464
Clinical trialMFSD3
Miscellaneous
canSAR (ICR)MFSD3 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD3
EVEXMFSD3
GoPubMedMFSD3
iHOPMFSD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:26:00 CEST 2017

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