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MFSD4 (major facilitator superfamily domain containing 4)

Identity

Other aliasUNQ3064
HGNC (Hugo) MFSD4
LocusID (NCBI) 148808
Atlas_Id 68942
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 205538112 and ends at 205572046 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD4   25433
Cards
Entrez_Gene (NCBI)MFSD4  148808  major facilitator superfamily domain containing 4
AliasesUNQ3064
GeneCards (Weizmann)MFSD4
Ensembl hg19 (Hinxton)ENSG00000174514 [Gene_View]  chr1:205538112-205572046 [Contig_View]  MFSD4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000174514 [Gene_View]  chr1:205538112-205572046 [Contig_View]  MFSD4 [Vega]
ICGC DataPortalENSG00000174514
TCGA cBioPortalMFSD4
AceView (NCBI)MFSD4
Genatlas (Paris)MFSD4
WikiGenes148808
SOURCE (Princeton)MFSD4
Genetics Home Reference (NIH)MFSD4
Genomic and cartography
GoldenPath hg19 (UCSC)MFSD4  -     chr1:205538112-205572046 +  1q32.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MFSD4  -     1q32.1   [Description]    (hg38-Dec_2013)
EnsemblMFSD4 - 1q32.1 [CytoView hg19]  MFSD4 - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBIMFSD4 [Mapview hg19]  MFSD4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057733 AK090831 AK091896 AK127321 AK293816
RefSeq transcript (Entrez)NM_181644
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)MFSD4
Cluster EST : UnigeneHs.567714 [ NCBI ]
CGAP (NCI)Hs.567714
Alternative Splicing GalleryENSG00000174514
Gene ExpressionMFSD4 [ NCBI-GEO ]   MFSD4 [ EBI - ARRAY_EXPRESS ]   MFSD4 [ SEEK ]   MFSD4 [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148808
GTEX Portal (Tissue expression)MFSD4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N468   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N468  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N468
Splice isoforms : SwissVarQ8N468
PhosPhoSitePlusQ8N468
Domains : Interpro (EBI)MFS    MFS_dom   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)MFSD4
DMDM Disease mutations148808
Blocks (Seattle)MFSD4
SuperfamilyQ8N468
Human Protein AtlasENSG00000174514
Peptide AtlasQ8N468
HPRD13228
IPIIPI00329582   IPI00922619   IPI01012027   IPI00816638   
Protein Interaction databases
DIP (DOE-UCLA)Q8N468
IntAct (EBI)Q8N468
FunCoupENSG00000174514
BioGRIDMFSD4
STRING (EMBL)MFSD4
ZODIACMFSD4
Ontologies - Pathways
QuickGOQ8N468
Ontology : AmiGOintegral component of membrane  transmembrane transport  
Ontology : EGO-EBIintegral component of membrane  transmembrane transport  
NDEx NetworkMFSD4
Atlas of Cancer Signalling NetworkMFSD4
Wikipedia pathwaysMFSD4
Orthology - Evolution
OrthoDB148808
GeneTree (enSembl)ENSG00000174514
Phylogenetic Trees/Animal Genes : TreeFamMFSD4
HOVERGENQ8N468
HOGENOMQ8N468
Homologs : HomoloGeneMFSD4
Homology/Alignments : Family Browser (UCSC)MFSD4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD4
dbVarMFSD4
ClinVarMFSD4
1000_GenomesMFSD4 
Exome Variant ServerMFSD4
ExAC (Exome Aggregation Consortium)MFSD4 (select the gene name)
Genetic variants : HAPMAP148808
Genomic Variants (DGV)MFSD4 [DGVbeta]
DECIPHER (Syndromes)1:205538112-205572046  ENSG00000174514
CONAN: Copy Number AnalysisMFSD4 
Mutations
ICGC Data PortalMFSD4 
TCGA Data PortalMFSD4 
Broad Tumor PortalMFSD4
OASIS PortalMFSD4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFSD4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMFSD4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MFSD4
DgiDB (Drug Gene Interaction Database)MFSD4
DoCM (Curated mutations)MFSD4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD4 (select a term)
intoGenMFSD4
Cancer3DMFSD4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMFSD4
Genetic Testing Registry MFSD4
NextProtQ8N468 [Medical]
TSGene148808
GENETestsMFSD4
Huge Navigator MFSD4 [HugePedia]
snp3D : Map Gene to Disease148808
BioCentury BCIQMFSD4
ClinGenMFSD4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD148808
Chemical/Pharm GKB GenePA142671465
Clinical trialMFSD4
Miscellaneous
canSAR (ICR)MFSD4 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD4
EVEXMFSD4
GoPubMedMFSD4
iHOPMFSD4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:28:11 CET 2017

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