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MFSD4A (major facilitator superfamily domain containing 4A)

Identity

Alias_namesMFSD4
major facilitator superfamily domain containing 4
Alias_symbol (synonym)DKFZp761N1114
FLJ34577
UNQ3064
FLJ25004
Other alias
HGNC (Hugo) MFSD4A
LocusID (NCBI) 148808
Atlas_Id 77922
Location 1q32.1  [Link to chromosome band 1q32]
Location_base_pair Starts at 205568984 and ends at 205602918 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TTC37 (5q15) / MFSD4A (1q32.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD4A   25433
Cards
Entrez_Gene (NCBI)MFSD4A  148808  major facilitator superfamily domain containing 4A
AliasesMFSD4; UNQ3064
GeneCards (Weizmann)MFSD4A
Ensembl hg19 (Hinxton)ENSG00000174514 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174514 [Gene_View]  chr1:205568984-205602918 [Contig_View]  MFSD4A [Vega]
ICGC DataPortalENSG00000174514
TCGA cBioPortalMFSD4A
AceView (NCBI)MFSD4A
Genatlas (Paris)MFSD4A
WikiGenes148808
SOURCE (Princeton)MFSD4A
Genetics Home Reference (NIH)MFSD4A
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD4A  -     chr1:205568984-205602918 +  1q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD4A  -     1q32.1   [Description]    (hg19-Feb_2009)
EnsemblMFSD4A - 1q32.1 [CytoView hg19]  MFSD4A - 1q32.1 [CytoView hg38]
Mapping of homologs : NCBIMFSD4A [Mapview hg19]  MFSD4A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057733 AK090831 AK091896 AK127321 AK293816
RefSeq transcript (Entrez)NM_181644
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFSD4A
Cluster EST : UnigeneHs.567714 [ NCBI ]
CGAP (NCI)Hs.567714
Alternative Splicing GalleryENSG00000174514
Gene ExpressionMFSD4A [ NCBI-GEO ]   MFSD4A [ EBI - ARRAY_EXPRESS ]   MFSD4A [ SEEK ]   MFSD4A [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD4A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148808
GTEX Portal (Tissue expression)MFSD4A
Human Protein AtlasENSG00000174514-MFSD4A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N468   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N468  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N468
Splice isoforms : SwissVarQ8N468
PhosPhoSitePlusQ8N468
Domains : Interpro (EBI)MFS    MFS_dom   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)MFSD4A
DMDM Disease mutations148808
Blocks (Seattle)MFSD4A
SuperfamilyQ8N468
Human Protein Atlas [tissue]ENSG00000174514-MFSD4A [tissue]
Peptide AtlasQ8N468
HPRD13228
IPIIPI00329582   IPI00922619   IPI01012027   IPI00816638   
Protein Interaction databases
DIP (DOE-UCLA)Q8N468
IntAct (EBI)Q8N468
FunCoupENSG00000174514
BioGRIDMFSD4A
STRING (EMBL)MFSD4A
ZODIACMFSD4A
Ontologies - Pathways
QuickGOQ8N468
Ontology : AmiGOglucose transmembrane transporter activity  integral component of membrane  glucose transmembrane transport  
Ontology : EGO-EBIglucose transmembrane transporter activity  integral component of membrane  glucose transmembrane transport  
NDEx NetworkMFSD4A
Atlas of Cancer Signalling NetworkMFSD4A
Wikipedia pathwaysMFSD4A
Orthology - Evolution
OrthoDB148808
GeneTree (enSembl)ENSG00000174514
Phylogenetic Trees/Animal Genes : TreeFamMFSD4A
HOVERGENQ8N468
HOGENOMQ8N468
Homologs : HomoloGeneMFSD4A
Homology/Alignments : Family Browser (UCSC)MFSD4A
Gene fusions - Rearrangements
Fusion: Tumor Portal MFSD4A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD4A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD4A
dbVarMFSD4A
ClinVarMFSD4A
1000_GenomesMFSD4A 
Exome Variant ServerMFSD4A
ExAC (Exome Aggregation Consortium)ENSG00000174514
GNOMAD BrowserENSG00000174514
Genetic variants : HAPMAP148808
Genomic Variants (DGV)MFSD4A [DGVbeta]
DECIPHERMFSD4A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD4A 
Mutations
ICGC Data PortalMFSD4A 
TCGA Data PortalMFSD4A 
Broad Tumor PortalMFSD4A
OASIS PortalMFSD4A [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMFSD4A
BioMutasearch MFSD4A
DgiDB (Drug Gene Interaction Database)MFSD4A
DoCM (Curated mutations)MFSD4A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD4A (select a term)
intoGenMFSD4A
Cancer3DMFSD4A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMFSD4A
Genetic Testing Registry MFSD4A
NextProtQ8N468 [Medical]
TSGene148808
GENETestsMFSD4A
Target ValidationMFSD4A
Huge Navigator MFSD4A [HugePedia]
snp3D : Map Gene to Disease148808
BioCentury BCIQMFSD4A
ClinGenMFSD4A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD148808
Chemical/Pharm GKB GenePA142671465
Clinical trialMFSD4A
Miscellaneous
canSAR (ICR)MFSD4A (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD4A
EVEXMFSD4A
GoPubMedMFSD4A
iHOPMFSD4A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:12:40 CET 2017

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