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MFSD4B (major facilitator superfamily domain containing 4B)

Identity

Alias_namesKIAA1919
KIAA1919
Alias_symbol (synonym)MGC33953
Other aliasNaGLT1
HGNC (Hugo) MFSD4B
LocusID (NCBI) 91749
Atlas_Id 77923
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 111259279 and ends at 111269058 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MFSD4B (6q21) / TTTY14 (Yq11.222)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD4B   21053
Cards
Entrez_Gene (NCBI)MFSD4B  91749  major facilitator superfamily domain containing 4B
AliasesKIAA1919; NaGLT1
GeneCards (Weizmann)MFSD4B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6:111259279-111269058 [Contig_View]  MFSD4B [Vega]
TCGA cBioPortalMFSD4B
AceView (NCBI)MFSD4B
Genatlas (Paris)MFSD4B
WikiGenes91749
SOURCE (Princeton)MFSD4B
Genetics Home Reference (NIH)MFSD4B
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD4B  -     chr6:111259279-111269058 +  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD4B  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblMFSD4B - 6q21 [CytoView hg19]  MFSD4B - 6q21 [CytoView hg38]
Mapping of homologs : NCBIMFSD4B [Mapview hg19]  MFSD4B [Mapview hg38]
OMIM617331   
Gene and transcription
Genbank (Entrez)AB067506 AF161363 AI096577 AI151460 AK093136
RefSeq transcript (Entrez)NM_153369
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MFSD4B
Cluster EST : UnigeneHs.400572 [ NCBI ]
CGAP (NCI)Hs.400572
Gene ExpressionMFSD4B [ NCBI-GEO ]   MFSD4B [ EBI - ARRAY_EXPRESS ]   MFSD4B [ SEEK ]   MFSD4B [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD4B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91749
GTEX Portal (Tissue expression)MFSD4B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TF39   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TF39  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TF39
Splice isoforms : SwissVarQ5TF39
PhosPhoSitePlusQ5TF39
Domains : Interpro (EBI)MFS    MFS_dom   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)MFSD4B
DMDM Disease mutations91749
Blocks (Seattle)MFSD4B
SuperfamilyQ5TF39
Peptide AtlasQ5TF39
HPRD13904
IPIIPI00217751   
Protein Interaction databases
DIP (DOE-UCLA)Q5TF39
IntAct (EBI)Q5TF39
BioGRIDMFSD4B
STRING (EMBL)MFSD4B
ZODIACMFSD4B
Ontologies - Pathways
QuickGOQ5TF39
Ontology : AmiGOglucose transmembrane transporter activity  sodium ion transport  symporter activity  integral component of membrane  apical plasma membrane  glucose transmembrane transport  
Ontology : EGO-EBIglucose transmembrane transporter activity  sodium ion transport  symporter activity  integral component of membrane  apical plasma membrane  glucose transmembrane transport  
NDEx NetworkMFSD4B
Atlas of Cancer Signalling NetworkMFSD4B
Wikipedia pathwaysMFSD4B
Orthology - Evolution
OrthoDB91749
Phylogenetic Trees/Animal Genes : TreeFamMFSD4B
HOVERGENQ5TF39
HOGENOMQ5TF39
Homologs : HomoloGeneMFSD4B
Homology/Alignments : Family Browser (UCSC)MFSD4B
Gene fusions - Rearrangements
Fusion: Tumor Portal MFSD4B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD4B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD4B
dbVarMFSD4B
ClinVarMFSD4B
1000_GenomesMFSD4B 
Exome Variant ServerMFSD4B
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP91749
Genomic Variants (DGV)MFSD4B [DGVbeta]
DECIPHERMFSD4B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD4B 
Mutations
ICGC Data PortalMFSD4B 
TCGA Data PortalMFSD4B 
Broad Tumor PortalMFSD4B
OASIS PortalMFSD4B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMFSD4B
BioMutasearch MFSD4B
DgiDB (Drug Gene Interaction Database)MFSD4B
DoCM (Curated mutations)MFSD4B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD4B (select a term)
intoGenMFSD4B
Cancer3DMFSD4B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617331   
Orphanet
MedgenMFSD4B
Genetic Testing Registry MFSD4B
NextProtQ5TF39 [Medical]
TSGene91749
GENETestsMFSD4B
Target ValidationMFSD4B
Huge Navigator MFSD4B [HugePedia]
snp3D : Map Gene to Disease91749
BioCentury BCIQMFSD4B
ClinGenMFSD4B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91749
Chemical/Pharm GKB GenePA128394744
Clinical trialMFSD4B
Miscellaneous
canSAR (ICR)MFSD4B (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD4B
EVEXMFSD4B
GoPubMedMFSD4B
iHOPMFSD4B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:12:40 CET 2017

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