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MFSD6 (major facilitator superfamily domain containing 6)

Identity

Alias (NCBI)MMR2
hMMR2
HGNC (Hugo) MFSD6
HGNC Alias symbFLJ20160
LocusID (NCBI) 54842
Atlas_Id 68944
Location 2q32.2  [Link to chromosome band 2q32]
Location_base_pair Starts at 190408355 and ends at 190502314 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MFSD6 (2q32.2)::C2orf88 (2q32.2)MFSD6 (2q32.2)::CALCRL (2q32.1)MFSD6 (2q32.2)::CXorf66 (Xq27.1)
MFSD6 (2q32.2)::INPP1 (2q32.2)MFSD6 CXorf66MFSD6 C2orf88

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MFSD6   24711
Cards
Entrez_Gene (NCBI)MFSD6    major facilitator superfamily domain containing 6
AliasesMMR2; hMMR2
GeneCards (Weizmann)MFSD6
Ensembl hg19 (Hinxton)ENSG00000151690 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151690 [Gene_View]  ENSG00000151690 [Sequence]  chr2:190408355-190502314 [Contig_View]  MFSD6 [Vega]
ICGC DataPortalENSG00000151690
TCGA cBioPortalMFSD6
AceView (NCBI)MFSD6
Genatlas (Paris)MFSD6
SOURCE (Princeton)MFSD6
Genetics Home Reference (NIH)MFSD6
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD6  -     chr2:190408355-190502314 +  2q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD6  -     2q32.2   [Description]    (hg19-Feb_2009)
GoldenPathMFSD6 - 2q32.2 [CytoView hg19]  MFSD6 - 2q32.2 [CytoView hg38]
ImmunoBaseENSG00000151690
Genome Data Viewer NCBIMFSD6 [Mapview hg19]  
OMIM613476   
Gene and transcription
Genbank (Entrez)AB472299 AK000167 AK021420 AK098085 AK127176
RefSeq transcript (Entrez)NM_001375986 NM_001375987 NM_001375988 NM_001375989 NM_001375990 NM_001375992 NM_001375993 NM_001375994 NM_017694
Consensus coding sequences : CCDS (NCBI)MFSD6
Gene ExpressionMFSD6 [ NCBI-GEO ]   MFSD6 [ EBI - ARRAY_EXPRESS ]   MFSD6 [ SEEK ]   MFSD6 [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD6 [ Firebrowse - Broad ]
GenevisibleExpression of MFSD6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54842
GTEX Portal (Tissue expression)MFSD6
Human Protein AtlasENSG00000151690-MFSD6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZSS7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZSS7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZSS7
PhosPhoSitePlusQ6ZSS7
Domains : Interpro (EBI)MFS_assoc_dom    MFS_trans_sf   
Domain families : Pfam (Sanger)MFS_1_like (PF12832)   
Domain families : Pfam (NCBI)pfam12832   
Conserved Domain (NCBI)MFSD6
SuperfamilyQ6ZSS7
AlphaFold pdb e-kbQ6ZSS7   
Human Protein Atlas [tissue]ENSG00000151690-MFSD6 [tissue]
HPRD13369
Protein Interaction databases
DIP (DOE-UCLA)Q6ZSS7
IntAct (EBI)Q6ZSS7
BioGRIDMFSD6
STRING (EMBL)MFSD6
ZODIACMFSD6
Ontologies - Pathways
QuickGOQ6ZSS7
Ontology : AmiGOprotein binding  plasma membrane  membrane  membrane  integral component of membrane  antigen processing and presentation of exogenous peptide antigen via MHC class I  
Ontology : EGO-EBIprotein binding  plasma membrane  membrane  membrane  integral component of membrane  antigen processing and presentation of exogenous peptide antigen via MHC class I  
NDEx NetworkMFSD6
Atlas of Cancer Signalling NetworkMFSD6
Wikipedia pathwaysMFSD6
Orthology - Evolution
OrthoDB54842
GeneTree (enSembl)ENSG00000151690
Phylogenetic Trees/Animal Genes : TreeFamMFSD6
Homologs : HomoloGeneMFSD6
Homology/Alignments : Family Browser (UCSC)MFSD6
Gene fusions - Rearrangements
Fusion : QuiverMFSD6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD6
dbVarMFSD6
ClinVarMFSD6
MonarchMFSD6
1000_GenomesMFSD6 
Exome Variant ServerMFSD6
GNOMAD BrowserENSG00000151690
Varsome BrowserMFSD6
ACMGMFSD6 variants
VarityQ6ZSS7
Genomic Variants (DGV)MFSD6 [DGVbeta]
DECIPHERMFSD6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD6 
Mutations
ICGC Data PortalMFSD6 
TCGA Data PortalMFSD6 
Broad Tumor PortalMFSD6
OASIS PortalMFSD6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFSD6  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMFSD6
Mutations and Diseases : HGMDMFSD6
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMFSD6
DgiDB (Drug Gene Interaction Database)MFSD6
DoCM (Curated mutations)MFSD6
CIViC (Clinical Interpretations of Variants in Cancer)MFSD6
Cancer3DMFSD6
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613476   
Orphanet
DisGeNETMFSD6
MedgenMFSD6
Genetic Testing Registry MFSD6
NextProtQ6ZSS7 [Medical]
GENETestsMFSD6
Target ValidationMFSD6
Huge Navigator MFSD6 [HugePedia]
ClinGenMFSD6
Clinical trials, drugs, therapy
MyCancerGenomeMFSD6
Protein Interactions : CTDMFSD6
Pharm GKB GenePA164722278
PharosQ6ZSS7
Clinical trialMFSD6
Miscellaneous
canSAR (ICR)MFSD6
HarmonizomeMFSD6
ARCHS4MFSD6
DataMed IndexMFSD6
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMFSD6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:10:30 CET 2022

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