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MFSD7 (major facilitator superfamily domain containing 7)

Identity

Alias_symbol (synonym)FLJ22269
LP2561
Other alias
HGNC (Hugo) MFSD7
LocusID (NCBI) 84179
Atlas_Id 54452
Location 4p16.3  [Link to chromosome band 4p16]
Location_base_pair Starts at 675613 and ends at 683230 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ATP5I (4p16.3) / MFSD7 (4p16.3)MFSD7 (4p16.3) / ATP5I (4p16.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MFSD7   26177
Cards
Entrez_Gene (NCBI)MFSD7  84179  major facilitator superfamily domain containing 7
AliasesLP2561
GeneCards (Weizmann)MFSD7
Ensembl hg19 (Hinxton)ENSG00000169026 [Gene_View]  chr4:675613-683230 [Contig_View]  MFSD7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000169026 [Gene_View]  chr4:675613-683230 [Contig_View]  MFSD7 [Vega]
ICGC DataPortalENSG00000169026
TCGA cBioPortalMFSD7
AceView (NCBI)MFSD7
Genatlas (Paris)MFSD7
WikiGenes84179
SOURCE (Princeton)MFSD7
Genetics Home Reference (NIH)MFSD7
Genomic and cartography
GoldenPath hg19 (UCSC)MFSD7  -     chr4:675613-683230 -  4p16.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MFSD7  -     4p16.3   [Description]    (hg38-Dec_2013)
EnsemblMFSD7 - 4p16.3 [CytoView hg19]  MFSD7 - 4p16.3 [CytoView hg38]
Mapping of homologs : NCBIMFSD7 [Mapview hg19]  MFSD7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK025922 AK292010 AY203936 AY358401 BC030246
RefSeq transcript (Entrez)NM_001294341 NM_001294342 NM_032219
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_006051 NW_004929313
Consensus coding sequences : CCDS (NCBI)MFSD7
Cluster EST : UnigeneHs.567612 [ NCBI ]
CGAP (NCI)Hs.567612
Alternative Splicing GalleryENSG00000169026
Gene ExpressionMFSD7 [ NCBI-GEO ]   MFSD7 [ EBI - ARRAY_EXPRESS ]   MFSD7 [ SEEK ]   MFSD7 [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84179
GTEX Portal (Tissue expression)MFSD7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXD7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXD7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXD7
Splice isoforms : SwissVarQ6UXD7
PhosPhoSitePlusQ6UXD7
Domains : Interpro (EBI)MFS    MFS_dom   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)MFSD7
DMDM Disease mutations84179
Blocks (Seattle)MFSD7
SuperfamilyQ6UXD7
Human Protein AtlasENSG00000169026
Peptide AtlasQ6UXD7
HPRD08650
IPIIPI00827818   IPI00465320   IPI00030448   IPI00964652   IPI00967669   IPI00964966   IPI00967369   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXD7
IntAct (EBI)Q6UXD7
FunCoupENSG00000169026
BioGRIDMFSD7
STRING (EMBL)MFSD7
ZODIACMFSD7
Ontologies - Pathways
QuickGOQ6UXD7
Ontology : AmiGOintegral component of membrane  transmembrane transport  
Ontology : EGO-EBIintegral component of membrane  transmembrane transport  
NDEx NetworkMFSD7
Atlas of Cancer Signalling NetworkMFSD7
Wikipedia pathwaysMFSD7
Orthology - Evolution
OrthoDB84179
GeneTree (enSembl)ENSG00000169026
Phylogenetic Trees/Animal Genes : TreeFamMFSD7
HOVERGENQ6UXD7
HOGENOMQ6UXD7
Homologs : HomoloGeneMFSD7
Homology/Alignments : Family Browser (UCSC)MFSD7
Gene fusions - Rearrangements
Fusion : MitelmanATP5I/MFSD7 [4p16.3/4p16.3]  [t(4;4)(p16;p16)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD7
dbVarMFSD7
ClinVarMFSD7
1000_GenomesMFSD7 
Exome Variant ServerMFSD7
ExAC (Exome Aggregation Consortium)MFSD7 (select the gene name)
Genetic variants : HAPMAP84179
Genomic Variants (DGV)MFSD7 [DGVbeta]
DECIPHER (Syndromes)4:675613-683230  ENSG00000169026
CONAN: Copy Number AnalysisMFSD7 
Mutations
ICGC Data PortalMFSD7 
TCGA Data PortalMFSD7 
Broad Tumor PortalMFSD7
OASIS PortalMFSD7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFSD7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMFSD7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MFSD7
DgiDB (Drug Gene Interaction Database)MFSD7
DoCM (Curated mutations)MFSD7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MFSD7 (select a term)
intoGenMFSD7
Cancer3DMFSD7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMFSD7
Genetic Testing Registry MFSD7
NextProtQ6UXD7 [Medical]
TSGene84179
GENETestsMFSD7
Huge Navigator MFSD7 [HugePedia]
snp3D : Map Gene to Disease84179
BioCentury BCIQMFSD7
ClinGenMFSD7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84179
Chemical/Pharm GKB GenePA143485534
Clinical trialMFSD7
Miscellaneous
canSAR (ICR)MFSD7 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMFSD7
EVEXMFSD7
GoPubMedMFSD7
iHOPMFSD7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 15:09:04 CEST 2017

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