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MFSD9 (major facilitator superfamily domain containing 9)

Identity

Alias (NCBI)-
HGNC (Hugo) MFSD9
HGNC Alias symbMGC11332
LocusID (NCBI) 84804
Atlas_Id 68947
Location 2q12.1  [Link to chromosome band 2q12]
Location_base_pair Starts at 102714630 and ends at 102736888 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BPHL (6p25.2) / MFSD9 (2q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MFSD9   28158
Cards
Entrez_Gene (NCBI)MFSD9    major facilitator superfamily domain containing 9
Aliases
GeneCards (Weizmann)MFSD9
Ensembl hg19 (Hinxton)ENSG00000135953 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135953 [Gene_View]  ENSG00000135953 [Sequence]  chr2:102714630-102736888 [Contig_View]  MFSD9 [Vega]
ICGC DataPortalENSG00000135953
TCGA cBioPortalMFSD9
AceView (NCBI)MFSD9
Genatlas (Paris)MFSD9
SOURCE (Princeton)MFSD9
Genetics Home Reference (NIH)MFSD9
Genomic and cartography
GoldenPath hg38 (UCSC)MFSD9  -     chr2:102714630-102736888 -  2q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MFSD9  -     2q12.1   [Description]    (hg19-Feb_2009)
GoldenPathMFSD9 - 2q12.1 [CytoView hg19]  MFSD9 - 2q12.1 [CytoView hg38]
ImmunoBaseENSG00000135953
Genome Data Viewer NCBIMFSD9 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK075376 AK290589 AK296768 AK307178 BC006242
RefSeq transcript (Entrez)NM_001322080 NM_001322081 NM_032718
Consensus coding sequences : CCDS (NCBI)MFSD9
Gene ExpressionMFSD9 [ NCBI-GEO ]   MFSD9 [ EBI - ARRAY_EXPRESS ]   MFSD9 [ SEEK ]   MFSD9 [ MEM ]
Gene Expression Viewer (FireBrowse)MFSD9 [ Firebrowse - Broad ]
GenevisibleExpression of MFSD9 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84804
GTEX Portal (Tissue expression)MFSD9
Human Protein AtlasENSG00000135953-MFSD9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NBP5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NBP5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NBP5
PhosPhoSitePlusQ8NBP5
Domaine pattern : Prosite (Expaxy)MFS (PS50850)   
Domains : Interpro (EBI)MFS    MFS_dom    MFS_trans_sf    Sugar_transporter_CS    Tet-R_TetA/multi-R_MdtG   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)MFSD9
SuperfamilyQ8NBP5
AlphaFold pdb e-kbQ8NBP5   
Human Protein Atlas [tissue]ENSG00000135953-MFSD9 [tissue]
HPRD14418
Protein Interaction databases
DIP (DOE-UCLA)Q8NBP5
IntAct (EBI)Q8NBP5
BioGRIDMFSD9
STRING (EMBL)MFSD9
ZODIACMFSD9
Ontologies - Pathways
QuickGOQ8NBP5
Ontology : AmiGOintegral component of membrane  transmembrane transporter activity  transmembrane transport  
Ontology : EGO-EBIintegral component of membrane  transmembrane transporter activity  transmembrane transport  
NDEx NetworkMFSD9
Atlas of Cancer Signalling NetworkMFSD9
Wikipedia pathwaysMFSD9
Orthology - Evolution
OrthoDB84804
GeneTree (enSembl)ENSG00000135953
Phylogenetic Trees/Animal Genes : TreeFamMFSD9
Homologs : HomoloGeneMFSD9
Homology/Alignments : Family Browser (UCSC)MFSD9
Gene fusions - Rearrangements
Fusion : QuiverMFSD9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMFSD9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MFSD9
dbVarMFSD9
ClinVarMFSD9
MonarchMFSD9
1000_GenomesMFSD9 
Exome Variant ServerMFSD9
GNOMAD BrowserENSG00000135953
Varsome BrowserMFSD9
ACMGMFSD9 variants
VarityQ8NBP5
Genomic Variants (DGV)MFSD9 [DGVbeta]
DECIPHERMFSD9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMFSD9 
Mutations
ICGC Data PortalMFSD9 
TCGA Data PortalMFSD9 
Broad Tumor PortalMFSD9
OASIS PortalMFSD9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMFSD9  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMFSD9
Mutations and Diseases : HGMDMFSD9
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMFSD9
DgiDB (Drug Gene Interaction Database)MFSD9
DoCM (Curated mutations)MFSD9
CIViC (Clinical Interpretations of Variants in Cancer)MFSD9
Cancer3DMFSD9
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMFSD9
MedgenMFSD9
Genetic Testing Registry MFSD9
NextProtQ8NBP5 [Medical]
GENETestsMFSD9
Target ValidationMFSD9
Huge Navigator MFSD9 [HugePedia]
ClinGenMFSD9
Clinical trials, drugs, therapy
MyCancerGenomeMFSD9
Protein Interactions : CTDMFSD9
Pharm GKB GenePA162395873
PharosQ8NBP5
Clinical trialMFSD9
Miscellaneous
canSAR (ICR)MFSD9
HarmonizomeMFSD9
DataMed IndexMFSD9
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMFSD9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:07:16 CEST 2021

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