Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MGC27382 (uncharacterized MGC27382)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 149047
Atlas_Id 68961
Location 1p31.1  [Link to chromosome band 1p31]
Location_base_pair Starts at 78229599 and ends at 78293890 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)MGC27382  149047  uncharacterized MGC27382
Aliases
GeneCards (Weizmann)MGC27382
Ensembl hg19 (Hinxton)ENSG00000237413 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237413 [Gene_View]  chr1:78229599-78293890 [Contig_View]  MGC27382 [Vega]
ICGC DataPortalENSG00000237413
TCGA cBioPortalMGC27382
AceView (NCBI)MGC27382
Genatlas (Paris)MGC27382
WikiGenes149047
SOURCE (Princeton)MGC27382
Genetics Home Reference (NIH)MGC27382
Genomic and cartography
GoldenPath hg38 (UCSC)MGC27382  -     chr1:78229599-78293890 +  1p31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MGC27382  -     1p31.1   [Description]    (hg19-Feb_2009)
EnsemblMGC27382 - 1p31.1 [CytoView hg19]  MGC27382 - 1p31.1 [CytoView hg38]
Mapping of homologs : NCBIMGC27382 [Mapview hg19]  MGC27382 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091757 BC015860
RefSeq transcript (Entrez)NM_144700
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MGC27382
Cluster EST : UnigeneHs.352665 [ NCBI ]
CGAP (NCI)Hs.352665
Alternative Splicing GalleryENSG00000237413
Gene ExpressionMGC27382 [ NCBI-GEO ]   MGC27382 [ EBI - ARRAY_EXPRESS ]   MGC27382 [ SEEK ]   MGC27382 [ MEM ]
Gene Expression Viewer (FireBrowse)MGC27382 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)149047
GTEX Portal (Tissue expression)MGC27382
Human Protein AtlasENSG00000237413-MGC27382 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MGC27382
DMDM Disease mutations149047
Blocks (Seattle)MGC27382
Human Protein Atlas [tissue]ENSG00000237413-MGC27382 [tissue]
Protein Interaction databases
FunCoupENSG00000237413
BioGRIDMGC27382
STRING (EMBL)MGC27382
ZODIACMGC27382
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease149047
BioCentury BCIQMGC27382
ClinGenMGC27382
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD149047
Clinical trialMGC27382
Miscellaneous
canSAR (ICR)MGC27382 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMGC27382
EVEXMGC27382
GoPubMedMGC27382
iHOPMGC27382
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:56:31 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.