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MIA (melanoma inhibitory activity)

Identity

Alias_symbol (synonym)CD-RAP
Other alias
HGNC (Hugo) MIA
LocusID (NCBI) 8190
Atlas_Id 41362
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 41281082 and ends at 41283398 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIA   7076
Cards
Entrez_Gene (NCBI)MIA  8190  melanoma inhibitory activity
AliasesCD-RAP
GeneCards (Weizmann)MIA
Ensembl hg19 (Hinxton)ENSG00000261857 [Gene_View]  chr19:41281082-41283398 [Contig_View]  MIA [Vega]
Ensembl hg38 (Hinxton)ENSG00000261857 [Gene_View]  chr19:41281082-41283398 [Contig_View]  MIA [Vega]
ICGC DataPortalENSG00000261857
TCGA cBioPortalMIA
AceView (NCBI)MIA
Genatlas (Paris)MIA
WikiGenes8190
SOURCE (Princeton)MIA
Genetics Home Reference (NIH)MIA
Genomic and cartography
GoldenPath hg19 (UCSC)MIA  -     chr19:41281082-41283398 +  19q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIA  -     19q13.2   [Description]    (hg38-Dec_2013)
EnsemblMIA - 19q13.2 [CytoView hg19]  MIA - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBIMIA [Mapview hg19]  MIA [Mapview hg38]
OMIM601340   
Gene and transcription
Genbank (Entrez)BC005910 BM715936 BM856478 BQ681978 BT007044
RefSeq transcript (Entrez)NM_001202553 NM_006533
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)MIA
Cluster EST : UnigeneHs.646364 [ NCBI ]
CGAP (NCI)Hs.646364
Alternative Splicing GalleryENSG00000261857
Gene ExpressionMIA [ NCBI-GEO ]   MIA [ EBI - ARRAY_EXPRESS ]   MIA [ SEEK ]   MIA [ MEM ]
Gene Expression Viewer (FireBrowse)MIA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8190
GTEX Portal (Tissue expression)MIA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16674   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16674  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16674
Splice isoforms : SwissVarQ16674
PhosPhoSitePlusQ16674
Domaine pattern : Prosite (Expaxy)SH3 (PS50002)   
Domains : Interpro (EBI)SH3_2    SH3_domain   
Domain families : Pfam (Sanger)SH3_2 (PF07653)   
Domain families : Pfam (NCBI)pfam07653   
Domain families : Smart (EMBL)SH3 (SM00326)  
Conserved Domain (NCBI)MIA
DMDM Disease mutations8190
Blocks (Seattle)MIA
PDB (SRS)1HJD    1I1J    1K0X   
PDB (PDBSum)1HJD    1I1J    1K0X   
PDB (IMB)1HJD    1I1J    1K0X   
PDB (RSDB)1HJD    1I1J    1K0X   
Structural Biology KnowledgeBase1HJD    1I1J    1K0X   
SCOP (Structural Classification of Proteins)1HJD    1I1J    1K0X   
CATH (Classification of proteins structures)1HJD    1I1J    1K0X   
SuperfamilyQ16674
Human Protein AtlasENSG00000261857
Peptide AtlasQ16674
HPRD03216
IPIIPI00003448   IPI01012402   
Protein Interaction databases
DIP (DOE-UCLA)Q16674
IntAct (EBI)Q16674
FunCoupENSG00000261857
BioGRIDMIA
STRING (EMBL)MIA
ZODIACMIA
Ontologies - Pathways
QuickGOQ16674
Ontology : AmiGOextracellular space  growth factor activity  cell proliferation  
Ontology : EGO-EBIextracellular space  growth factor activity  cell proliferation  
NDEx NetworkMIA
Atlas of Cancer Signalling NetworkMIA
Wikipedia pathwaysMIA
Orthology - Evolution
OrthoDB8190
GeneTree (enSembl)ENSG00000261857
Phylogenetic Trees/Animal Genes : TreeFamMIA
HOVERGENQ16674
HOGENOMQ16674
Homologs : HomoloGeneMIA
Homology/Alignments : Family Browser (UCSC)MIA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMIA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MIA
dbVarMIA
ClinVarMIA
1000_GenomesMIA 
Exome Variant ServerMIA
ExAC (Exome Aggregation Consortium)MIA (select the gene name)
Genetic variants : HAPMAP8190
Genomic Variants (DGV)MIA [DGVbeta]
DECIPHER (Syndromes)19:41281082-41283398  ENSG00000261857
CONAN: Copy Number AnalysisMIA 
Mutations
ICGC Data PortalMIA 
TCGA Data PortalMIA 
Broad Tumor PortalMIA
OASIS PortalMIA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMIA  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMIA
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MIA
DgiDB (Drug Gene Interaction Database)MIA
DoCM (Curated mutations)MIA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MIA (select a term)
intoGenMIA
Cancer3DMIA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601340   
Orphanet
MedgenMIA
Genetic Testing Registry MIA
NextProtQ16674 [Medical]
TSGene8190
GENETestsMIA
Huge Navigator MIA [HugePedia]
snp3D : Map Gene to Disease8190
BioCentury BCIQMIA
ClinGenMIA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8190
Chemical/Pharm GKB GenePA30800
Clinical trialMIA
Miscellaneous
canSAR (ICR)MIA (select the gene name)
Probes
Litterature
PubMed47 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIA
EVEXMIA
GoPubMedMIA
iHOPMIA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:09:08 CEST 2017

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