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MIA2 (melanoma inhibitory activity 2)

Identity

Alias_symbol (synonym)FLJ22404
TALI
Other aliasCTAGE5
MEA6
MGEA
MGEA11
MGEA6
HGNC (Hugo) MIA2
LocusID (NCBI) 117153
Atlas_Id 41363
Location 14q21.1  [Link to chromosome band 14q21]
Location_base_pair Starts at 39266298 and ends at 39351193 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CTAGE5 (14q21.1) / MIA2 (14q21.1)CTAGE5 14q21.1 / MIA2 14q21.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIA2   18432
Cards
Entrez_Gene (NCBI)MIA2  117153  melanoma inhibitory activity 2
AliasesCTAGE5; MEA6; MGEA; MGEA11; 
MGEA6
GeneCards (Weizmann)MIA2
Ensembl hg19 (Hinxton)ENSG00000150526 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150526 [Gene_View]  chr14:39266298-39351193 [Contig_View]  MIA2 [Vega]
ICGC DataPortalENSG00000150526
TCGA cBioPortalMIA2
AceView (NCBI)MIA2
Genatlas (Paris)MIA2
WikiGenes117153
SOURCE (Princeton)MIA2
Genetics Home Reference (NIH)MIA2
Genomic and cartography
GoldenPath hg38 (UCSC)MIA2  -     chr14:39266298-39351193 +  14q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIA2  -     14q21.1   [Description]    (hg19-Feb_2009)
EnsemblMIA2 - 14q21.1 [CytoView hg19]  MIA2 - 14q21.1 [CytoView hg38]
Mapping of homologs : NCBIMIA2 [Mapview hg19]  MIA2 [Mapview hg38]
OMIM602132   
Gene and transcription
Genbank (Entrez)###############################################################################################################################################################################################################################################################
RefSeq transcript (Entrez)NM_001247988 NM_001247989 NM_001247990 NM_001329214 NM_005930 NM_054024 NM_203354 NM_203355 NM_203356 NM_203357
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIA2
Cluster EST : UnigeneHs.741763 [ NCBI ]
CGAP (NCI)Hs.741763
Alternative Splicing GalleryENSG00000150526
Gene ExpressionMIA2 [ NCBI-GEO ]   MIA2 [ EBI - ARRAY_EXPRESS ]   MIA2 [ SEEK ]   MIA2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)117153
GTEX Portal (Tissue expression)MIA2
Human Protein AtlasENSG00000150526-MIA2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96PC5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96PC5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96PC5
Splice isoforms : SwissVarQ96PC5
PhosPhoSitePlusQ96PC5
Domains : Interpro (EBI)SH3_2    SH3_domain   
Domain families : Pfam (Sanger)SH3_2 (PF07653)   
Domain families : Pfam (NCBI)pfam07653   
Conserved Domain (NCBI)MIA2
DMDM Disease mutations117153
Blocks (Seattle)MIA2
SuperfamilyQ96PC5
Human Protein Atlas [tissue]ENSG00000150526-MIA2 [tissue]
Peptide AtlasQ96PC5
HPRD12149
IPIIPI00006122   IPI00218139   IPI00401163   IPI00515009   IPI00915443   IPI00872345   IPI00915291   IPI00915283   IPI00908361   IPI01025863   IPI01025352   IPI00402229   
Protein Interaction databases
DIP (DOE-UCLA)Q96PC5
IntAct (EBI)Q96PC5
FunCoupENSG00000150526
BioGRIDMIA2
STRING (EMBL)MIA2
ZODIACMIA2
Ontologies - Pathways
QuickGOQ96PC5
Ontology : AmiGOprotein binding  endoplasmic reticulum membrane  endoplasmic reticulum membrane  ER to Golgi vesicle-mediated transport  ER to Golgi vesicle-mediated transport  enzyme activator activity  membrane  integral component of membrane  protein exit from endoplasmic reticulum  cargo loading into vesicle  cholesterol homeostasis  positive regulation of catalytic activity  triglyceride homeostasis  endoplasmic reticulum exit site  protein localization to endoplasmic reticulum exit site  regulation of guanyl-nucleotide exchange factor activity  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum membrane  endoplasmic reticulum membrane  ER to Golgi vesicle-mediated transport  ER to Golgi vesicle-mediated transport  enzyme activator activity  membrane  integral component of membrane  protein exit from endoplasmic reticulum  cargo loading into vesicle  cholesterol homeostasis  positive regulation of catalytic activity  triglyceride homeostasis  endoplasmic reticulum exit site  protein localization to endoplasmic reticulum exit site  regulation of guanyl-nucleotide exchange factor activity  
NDEx NetworkMIA2
Atlas of Cancer Signalling NetworkMIA2
Wikipedia pathwaysMIA2
Orthology - Evolution
OrthoDB117153
GeneTree (enSembl)ENSG00000150526
Phylogenetic Trees/Animal Genes : TreeFamMIA2
HOVERGENQ96PC5
HOGENOMQ96PC5
Homologs : HomoloGeneMIA2
Homology/Alignments : Family Browser (UCSC)MIA2
Gene fusions - Rearrangements
Fusion : MitelmanCTAGE5/MIA2 [14q21.1/14q21.1]  [t(14;14)(q21;q21)]  
Fusion: TCGA_MDACCCTAGE5 14q21.1 MIA2 14q21.1 HNSC
Tumor Fusion PortalMIA2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMIA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MIA2
dbVarMIA2
ClinVarMIA2
1000_GenomesMIA2 
Exome Variant ServerMIA2
ExAC (Exome Aggregation Consortium)ENSG00000150526
GNOMAD BrowserENSG00000150526
Genetic variants : HAPMAP117153
Genomic Variants (DGV)MIA2 [DGVbeta]
DECIPHERMIA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMIA2 
Mutations
ICGC Data PortalMIA2 
TCGA Data PortalMIA2 
Broad Tumor PortalMIA2
OASIS PortalMIA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMIA2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMIA2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MIA2
DgiDB (Drug Gene Interaction Database)MIA2
DoCM (Curated mutations)MIA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MIA2 (select a term)
intoGenMIA2
Cancer3DMIA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602132   
Orphanet
DisGeNETMIA2
MedgenMIA2
Genetic Testing Registry MIA2
NextProtQ96PC5 [Medical]
TSGene117153
GENETestsMIA2
Target ValidationMIA2
Huge Navigator MIA2 [HugePedia]
snp3D : Map Gene to Disease117153
BioCentury BCIQMIA2
ClinGenMIA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD117153
Chemical/Pharm GKB GenePA30788
Clinical trialMIA2
Miscellaneous
canSAR (ICR)MIA2 (select the gene name)
Probes
Litterature
PubMed44 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIA2
EVEXMIA2
GoPubMedMIA2
iHOPMIA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:22:21 CET 2017

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