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MIA2 (melanoma inhibitory activity 2)

Identity

Alias_symbol (synonym)FLJ22404
TALI
Other alias-
HGNC (Hugo) MIA2
LocusID (NCBI) 117153
Atlas_Id 41363
Location 14q21.1  [Link to chromosome band 14q21]
Location_base_pair Starts at 39703125 and ends at 39722575 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CTAGE5 (14q21.1) / MIA2 (14q21.1)CTAGE5 14q21.1 / MIA2 14q21.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIA2   18432
Cards
Entrez_Gene (NCBI)MIA2  117153  melanoma inhibitory activity 2
Aliases
GeneCards (Weizmann)MIA2
Ensembl hg19 (Hinxton)ENSG00000150526 [Gene_View]  chr14:39703125-39722575 [Contig_View]  MIA2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000150526 [Gene_View]  chr14:39703125-39722575 [Contig_View]  MIA2 [Vega]
ICGC DataPortalENSG00000150526
TCGA cBioPortalMIA2
AceView (NCBI)MIA2
Genatlas (Paris)MIA2
WikiGenes117153
SOURCE (Princeton)MIA2
Genetics Home Reference (NIH)MIA2
Genomic and cartography
GoldenPath hg19 (UCSC)MIA2  -     chr14:39703125-39722575 +  14q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIA2  -     14q21.1   [Description]    (hg38-Dec_2013)
EnsemblMIA2 - 14q21.1 [CytoView hg19]  MIA2 - 14q21.1 [CytoView hg38]
Mapping of homologs : NCBIMIA2 [Mapview hg19]  MIA2 [Mapview hg38]
OMIM608001   
Gene and transcription
Genbank (Entrez)AF390175 AK026057 AK314069 AM393252 AM393582
RefSeq transcript (Entrez)NM_054024
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)MIA2
Cluster EST : UnigeneHs.287694 [ NCBI ]
CGAP (NCI)Hs.287694
Alternative Splicing GalleryENSG00000150526
Gene ExpressionMIA2 [ NCBI-GEO ]   MIA2 [ EBI - ARRAY_EXPRESS ]   MIA2 [ SEEK ]   MIA2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)117153
GTEX Portal (Tissue expression)MIA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96PC5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96PC5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96PC5
Splice isoforms : SwissVarQ96PC5
PhosPhoSitePlusQ96PC5
Domains : Interpro (EBI)MIA2    SH3_2    SH3_domain   
Domain families : Pfam (Sanger)SH3_2 (PF07653)   
Domain families : Pfam (NCBI)pfam07653   
Domain families : Smart (EMBL)SH3 (SM00326)  
Conserved Domain (NCBI)MIA2
DMDM Disease mutations117153
Blocks (Seattle)MIA2
SuperfamilyQ96PC5
Human Protein AtlasENSG00000150526
Peptide AtlasQ96PC5
HPRD12149
IPIIPI00044351   IPI00017905   IPI01024863   IPI01025433   
Protein Interaction databases
DIP (DOE-UCLA)Q96PC5
IntAct (EBI)Q96PC5
FunCoupENSG00000150526
BioGRIDMIA2
STRING (EMBL)MIA2
ZODIACMIA2
Ontologies - Pathways
QuickGOQ96PC5
Ontology : AmiGOextracellular region  cholesterol homeostasis  triglyceride homeostasis  endoplasmic reticulum exit site  
Ontology : EGO-EBIextracellular region  cholesterol homeostasis  triglyceride homeostasis  endoplasmic reticulum exit site  
NDEx NetworkMIA2
Atlas of Cancer Signalling NetworkMIA2
Wikipedia pathwaysMIA2
Orthology - Evolution
OrthoDB117153
GeneTree (enSembl)ENSG00000150526
Phylogenetic Trees/Animal Genes : TreeFamMIA2
HOVERGENQ96PC5
HOGENOMQ96PC5
Homologs : HomoloGeneMIA2
Homology/Alignments : Family Browser (UCSC)MIA2
Gene fusions - Rearrangements
Fusion : MitelmanCTAGE5/MIA2 [14q21.1/14q21.1]  [t(14;14)(q21;q21)]  
Fusion: TCGACTAGE5 14q21.1 MIA2 14q21.1 HNSC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMIA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MIA2
dbVarMIA2
ClinVarMIA2
1000_GenomesMIA2 
Exome Variant ServerMIA2
ExAC (Exome Aggregation Consortium)MIA2 (select the gene name)
Genetic variants : HAPMAP117153
Genomic Variants (DGV)MIA2 [DGVbeta]
DECIPHER (Syndromes)14:39703125-39722575  ENSG00000150526
CONAN: Copy Number AnalysisMIA2 
Mutations
ICGC Data PortalMIA2 
TCGA Data PortalMIA2 
Broad Tumor PortalMIA2
OASIS PortalMIA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMIA2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMIA2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MIA2
DgiDB (Drug Gene Interaction Database)MIA2
DoCM (Curated mutations)MIA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MIA2 (select a term)
intoGenMIA2
Cancer3DMIA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608001   
Orphanet
MedgenMIA2
Genetic Testing Registry MIA2
NextProtQ96PC5 [Medical]
TSGene117153
GENETestsMIA2
Huge Navigator MIA2 [HugePedia]
snp3D : Map Gene to Disease117153
BioCentury BCIQMIA2
ClinGenMIA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD117153
Chemical/Pharm GKB GenePA134870998
Clinical trialMIA2
Miscellaneous
canSAR (ICR)MIA2 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIA2
EVEXMIA2
GoPubMedMIA2
iHOPMIA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:09:08 CEST 2017

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