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MIAT (myocardial infarction associated transcript (non-protein coding))

Identity

Alias_namesC22orf35
chromosome 22 open reading frame 35
Alias_symbol (synonym)FLJ25967
Rncr2
gomafu
NCRNA00066
LINC00066
lncRNA-MIAT
Other aliasGOMAFU
RNCR2
HGNC (Hugo) MIAT
LocusID (NCBI) 440823
Atlas_Id 68973
Location 22q12.1  [Link to chromosome band 22q12]
Location_base_pair Starts at 27053446 and ends at 27072440 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MIAT (22q12.1) / CDH13 (16q23.3)MIAT (22q12.1) / FEM1A (19p13.3)SFXN5 (2p13.2) / MIAT (22q12.1)
SORBS1 (10q24.1) / MIAT (22q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIAT   33425
Cards
Entrez_Gene (NCBI)MIAT  440823  myocardial infarction associated transcript (non-protein coding)
AliasesC22orf35; GOMAFU; LINC00066; NCRNA00066; 
RNCR2; lncRNA-MIAT
GeneCards (Weizmann)MIAT
Ensembl hg19 (Hinxton)ENSG00000225783 [Gene_View]  chr22:27053446-27072440 [Contig_View]  MIAT [Vega]
Ensembl hg38 (Hinxton)ENSG00000225783 [Gene_View]  chr22:27053446-27072440 [Contig_View]  MIAT [Vega]
ICGC DataPortalENSG00000225783
TCGA cBioPortalMIAT
AceView (NCBI)MIAT
Genatlas (Paris)MIAT
WikiGenes440823
SOURCE (Princeton)MIAT
Genetics Home Reference (NIH)MIAT
Genomic and cartography
GoldenPath hg19 (UCSC)MIAT  -     chr22:27053446-27072440 +  22q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIAT  -     22q12.1   [Description]    (hg38-Dec_2013)
EnsemblMIAT - 22q12.1 [CytoView hg19]  MIAT - 22q12.1 [CytoView hg38]
Mapping of homologs : NCBIMIAT [Mapview hg19]  MIAT [Mapview hg38]
OMIM608446   611082   
Gene and transcription
Genbank (Entrez)AB263414 AB263415 AB263416 AB263417 AK095686
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NG_016621 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)MIAT
Cluster EST : UnigeneHs.517502 [ NCBI ]
CGAP (NCI)Hs.517502
Alternative Splicing GalleryENSG00000225783
Gene ExpressionMIAT [ NCBI-GEO ]   MIAT [ EBI - ARRAY_EXPRESS ]   MIAT [ SEEK ]   MIAT [ MEM ]
Gene Expression Viewer (FireBrowse)MIAT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440823
GTEX Portal (Tissue expression)MIAT
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIAT
DMDM Disease mutations440823
Blocks (Seattle)MIAT
Human Protein AtlasENSG00000225783
IPIIPI00921354   
Protein Interaction databases
FunCoupENSG00000225783
BioGRIDMIAT
STRING (EMBL)MIAT
ZODIACMIAT
Ontologies - Pathways
Huge Navigator MIAT [HugePedia]
snp3D : Map Gene to Disease440823
BioCentury BCIQMIAT
ClinGenMIAT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440823
Chemical/Pharm GKB GenePA162395890
Clinical trialMIAT
Miscellaneous
canSAR (ICR)MIAT (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIAT
EVEXMIAT
GoPubMedMIAT
iHOPMIAT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:28:19 CET 2017

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