Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIAT (myocardial infarction associated transcript (non-protein coding))

Identity

Other aliasC22orf35
GOMAFU
LINC00066
NCRNA00066
RNCR2
lncRNA-MIAT
HGNC (Hugo) MIAT
LocusID (NCBI) 440823
Atlas_Id 57211
Location 22q12.1  [Link to chromosome band 22q12]
Location_base_pair Starts at 26657520 and ends at 26676475 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MIAT (22q12.1) / CDH13 (16q23.3)MIAT (22q12.1) / FEM1A (19p13.3)SFXN5 (2p13.2) / MIAT (22q12.1)
SORBS1 (10q24.1) / MIAT (22q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIAT   33425
Cards
Entrez_Gene (NCBI)MIAT  440823  myocardial infarction associated transcript (non-protein coding)
AliasesC22orf35; GOMAFU; LINC00066; NCRNA00066; 
RNCR2; lncRNA-MIAT
GeneCards (Weizmann)MIAT
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:26657520-26676475 [Contig_View]  MIAT [Vega]
TCGA cBioPortalMIAT
AceView (NCBI)MIAT
Genatlas (Paris)MIAT
WikiGenes440823
SOURCE (Princeton)MIAT
Genetics Home Reference (NIH)MIAT
Genomic and cartography
GoldenPath hg38 (UCSC)MIAT  -     chr22:26657520-26676475 +  22q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIAT  -     22q12.1   [Description]    (hg19-Feb_2009)
EnsemblMIAT - 22q12.1 [CytoView hg19]  MIAT - 22q12.1 [CytoView hg38]
Mapping of homologs : NCBIMIAT [Mapview hg19]  MIAT [Mapview hg38]
OMIM608446   611082   
Gene and transcription
Genbank (Entrez)AB263414 AB263415 AB263416 AB263417 AK095686
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIAT
Cluster EST : UnigeneHs.517502 [ NCBI ]
CGAP (NCI)Hs.517502
Gene ExpressionMIAT [ NCBI-GEO ]   MIAT [ EBI - ARRAY_EXPRESS ]   MIAT [ SEEK ]   MIAT [ MEM ]
Gene Expression Viewer (FireBrowse)MIAT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440823
GTEX Portal (Tissue expression)MIAT
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIAT
DMDM Disease mutations440823
Blocks (Seattle)MIAT
IPIIPI00921354   
Protein Interaction databases
BioGRIDMIAT
STRING (EMBL)MIAT
ZODIACMIAT
Ontologies - Pathways
Huge Navigator MIAT [HugePedia]
snp3D : Map Gene to Disease440823
BioCentury BCIQMIAT
ClinGenMIAT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440823
Chemical/Pharm GKB GenePA162395890
Clinical trialMIAT
Miscellaneous
canSAR (ICR)MIAT (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIAT
EVEXMIAT
GoPubMedMIAT
iHOPMIAT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:22:21 CET 2017

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