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MID1IP1 (MID1 interacting protein 1)

Identity

Alias (NCBI)G12-like
MIG12
S14R
STRAIT11499
THRSPL
HGNC (Hugo) MID1IP1
HGNC Alias symbSTRAIT11499
FLJ10386
MIG12
THRSPL
G12-like
HGNC Alias namegastrulation specific G12 homolog (zebrafish)
HGNC Previous nameMID1 interacting protein 1 (gastrulation specific G12-like (zebrafish))
LocusID (NCBI) 58526
Atlas_Id 68980
Location Xp11.4  [Link to chromosome band Xp11]
Location_base_pair Starts at 38801432 and ends at 38806530 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MID1IP1   20715
Cards
Entrez_Gene (NCBI)MID1IP1    MID1 interacting protein 1
AliasesG12-like; MIG12; S14R; STRAIT11499; 
THRSPL
GeneCards (Weizmann)MID1IP1
Ensembl hg19 (Hinxton)ENSG00000165175 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165175 [Gene_View]  ENSG00000165175 [Sequence]  chrX:38801432-38806530 [Contig_View]  MID1IP1 [Vega]
ICGC DataPortalENSG00000165175
TCGA cBioPortalMID1IP1
AceView (NCBI)MID1IP1
Genatlas (Paris)MID1IP1
SOURCE (Princeton)MID1IP1
Genetics Home Reference (NIH)MID1IP1
Genomic and cartography
GoldenPath hg38 (UCSC)MID1IP1  -     chrX:38801432-38806530 +  Xp11.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MID1IP1  -     Xp11.4   [Description]    (hg19-Feb_2009)
GoldenPathMID1IP1 - Xp11.4 [CytoView hg19]  MID1IP1 - Xp11.4 [CytoView hg38]
ImmunoBaseENSG00000165175
Genome Data Viewer NCBIMID1IP1 [Mapview hg19]  
OMIM300961   
Gene and transcription
Genbank (Entrez)AF050158 AJ272057 AK001248 AW086438 BC008908
RefSeq transcript (Entrez)NM_001098790 NM_001098791 NM_021242
Consensus coding sequences : CCDS (NCBI)MID1IP1
Gene ExpressionMID1IP1 [ NCBI-GEO ]   MID1IP1 [ EBI - ARRAY_EXPRESS ]   MID1IP1 [ SEEK ]   MID1IP1 [ MEM ]
Gene Expression Viewer (FireBrowse)MID1IP1 [ Firebrowse - Broad ]
GenevisibleExpression of MID1IP1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)58526
GTEX Portal (Tissue expression)MID1IP1
Human Protein AtlasENSG00000165175-MID1IP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NPA3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NPA3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NPA3
PhosPhoSitePlusQ9NPA3
Domains : Interpro (EBI)Spot_14   
Domain families : Pfam (Sanger)Spot_14 (PF07084)   
Domain families : Pfam (NCBI)pfam07084   
Conserved Domain (NCBI)MID1IP1
SuperfamilyQ9NPA3
AlphaFold pdb e-kbQ9NPA3   
Human Protein Atlas [tissue]ENSG00000165175-MID1IP1 [tissue]
HPRD06732
Protein Interaction databases
DIP (DOE-UCLA)Q9NPA3
IntAct (EBI)Q9NPA3
BioGRIDMID1IP1
STRING (EMBL)MID1IP1
ZODIACMID1IP1
Ontologies - Pathways
QuickGOQ9NPA3
Ontology : AmiGOprotein binding  nucleus  cytosol  cytosol  cytosol  microtubule  lipid metabolic process  carnitine shuttle  negative regulation of microtubule depolymerization  protein C-terminus binding  microtubule cytoskeleton  identical protein binding  positive regulation of fatty acid biosynthetic process  regulation of lipid biosynthetic process  regulation of lipid biosynthetic process  protein polymerization  positive regulation of ligase activity  
Ontology : EGO-EBIprotein binding  nucleus  cytosol  cytosol  cytosol  microtubule  lipid metabolic process  carnitine shuttle  negative regulation of microtubule depolymerization  protein C-terminus binding  microtubule cytoskeleton  identical protein binding  positive regulation of fatty acid biosynthetic process  regulation of lipid biosynthetic process  regulation of lipid biosynthetic process  protein polymerization  positive regulation of ligase activity  
NDEx NetworkMID1IP1
Atlas of Cancer Signalling NetworkMID1IP1
Wikipedia pathwaysMID1IP1
Orthology - Evolution
OrthoDB58526
GeneTree (enSembl)ENSG00000165175
Phylogenetic Trees/Animal Genes : TreeFamMID1IP1
Homologs : HomoloGeneMID1IP1
Homology/Alignments : Family Browser (UCSC)MID1IP1
Gene fusions - Rearrangements
Fusion : QuiverMID1IP1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMID1IP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MID1IP1
dbVarMID1IP1
ClinVarMID1IP1
MonarchMID1IP1
1000_GenomesMID1IP1 
Exome Variant ServerMID1IP1
GNOMAD BrowserENSG00000165175
Varsome BrowserMID1IP1
ACMGMID1IP1 variants
VarityQ9NPA3
Genomic Variants (DGV)MID1IP1 [DGVbeta]
DECIPHERMID1IP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMID1IP1 
Mutations
ICGC Data PortalMID1IP1 
TCGA Data PortalMID1IP1 
Broad Tumor PortalMID1IP1
OASIS PortalMID1IP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMID1IP1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMID1IP1
Mutations and Diseases : HGMDMID1IP1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMID1IP1
DgiDB (Drug Gene Interaction Database)MID1IP1
DoCM (Curated mutations)MID1IP1
CIViC (Clinical Interpretations of Variants in Cancer)MID1IP1
Cancer3DMID1IP1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300961   
Orphanet
DisGeNETMID1IP1
MedgenMID1IP1
Genetic Testing Registry MID1IP1
NextProtQ9NPA3 [Medical]
GENETestsMID1IP1
Target ValidationMID1IP1
Huge Navigator MID1IP1 [HugePedia]
ClinGenMID1IP1
Clinical trials, drugs, therapy
MyCancerGenomeMID1IP1
Protein Interactions : CTDMID1IP1
Pharm GKB GenePA134941916
PharosQ9NPA3
Clinical trialMID1IP1
Miscellaneous
canSAR (ICR)MID1IP1
HarmonizomeMID1IP1
DataMed IndexMID1IP1
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMID1IP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:07:22 CEST 2021

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