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MIF4GD (MIF4G domain containing)

Identity

Alias_namesMIFD
Alias_symbol (synonym)AD023
MGC45027
SLIP1
Other alias
HGNC (Hugo) MIF4GD
LocusID (NCBI) 57409
Atlas_Id 56590
Location 17q25.1  [Link to chromosome band 17q25]
Location_base_pair Starts at 73262310 and ends at 73267311 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
LZTR1 (22q11.21) / MIF4GD (17q25.1)MIF4GD (17q25.1) / SDK2 (17q25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIF4GD   24030
Cards
Entrez_Gene (NCBI)MIF4GD  57409  MIF4G domain containing
AliasesAD023; MIFD; SLIP1
GeneCards (Weizmann)MIF4GD
Ensembl hg19 (Hinxton)ENSG00000125457 [Gene_View]  chr17:73262310-73267311 [Contig_View]  MIF4GD [Vega]
Ensembl hg38 (Hinxton)ENSG00000125457 [Gene_View]  chr17:73262310-73267311 [Contig_View]  MIF4GD [Vega]
ICGC DataPortalENSG00000125457
TCGA cBioPortalMIF4GD
AceView (NCBI)MIF4GD
Genatlas (Paris)MIF4GD
WikiGenes57409
SOURCE (Princeton)MIF4GD
Genetics Home Reference (NIH)MIF4GD
Genomic and cartography
GoldenPath hg19 (UCSC)MIF4GD  -     chr17:73262310-73267311 -  17q25.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIF4GD  -     17q25.1   [Description]    (hg38-Dec_2013)
EnsemblMIF4GD - 17q25.1 [CytoView hg19]  MIF4GD - 17q25.1 [CytoView hg38]
Mapping of homologs : NCBIMIF4GD [Mapview hg19]  MIF4GD [Mapview hg38]
OMIM612072   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001242498 NM_001242500 NM_001242501 NM_020679
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIF4GD
Cluster EST : UnigeneHs.325631 [ NCBI ]
CGAP (NCI)Hs.325631
Alternative Splicing GalleryENSG00000125457
Gene ExpressionMIF4GD [ NCBI-GEO ]   MIF4GD [ EBI - ARRAY_EXPRESS ]   MIF4GD [ SEEK ]   MIF4GD [ MEM ]
Gene Expression Viewer (FireBrowse)MIF4GD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57409
GTEX Portal (Tissue expression)MIF4GD
Protein : pattern, domain, 3D structure
UniProt/SwissProtA9UHW6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA9UHW6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA9UHW6
Splice isoforms : SwissVarA9UHW6
PhosPhoSitePlusA9UHW6
Domains : Interpro (EBI)ARM-type_fold    MIF4-like    MIF4G-like_typ-3   
Domain families : Pfam (Sanger)MIF4G (PF02854)   
Domain families : Pfam (NCBI)pfam02854   
Domain families : Smart (EMBL)MIF4G (SM00543)  
Conserved Domain (NCBI)MIF4GD
DMDM Disease mutations57409
Blocks (Seattle)MIF4GD
SuperfamilyA9UHW6
Human Protein AtlasENSG00000125457
Peptide AtlasA9UHW6
HPRD10629
IPIIPI00010240   IPI00795812   
Protein Interaction databases
DIP (DOE-UCLA)A9UHW6
IntAct (EBI)A9UHW6
FunCoupENSG00000125457
BioGRIDMIF4GD
STRING (EMBL)MIF4GD
ZODIACMIF4GD
Ontologies - Pathways
QuickGOA9UHW6
Ontology : AmiGORNA binding  protein binding  nucleolus  cytoplasm  regulation of translation  protein C-terminus binding  
Ontology : EGO-EBIRNA binding  protein binding  nucleolus  cytoplasm  regulation of translation  protein C-terminus binding  
NDEx NetworkMIF4GD
Atlas of Cancer Signalling NetworkMIF4GD
Wikipedia pathwaysMIF4GD
Orthology - Evolution
OrthoDB57409
GeneTree (enSembl)ENSG00000125457
Phylogenetic Trees/Animal Genes : TreeFamMIF4GD
HOVERGENA9UHW6
HOGENOMA9UHW6
Homologs : HomoloGeneMIF4GD
Homology/Alignments : Family Browser (UCSC)MIF4GD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMIF4GD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MIF4GD
dbVarMIF4GD
ClinVarMIF4GD
1000_GenomesMIF4GD 
Exome Variant ServerMIF4GD
ExAC (Exome Aggregation Consortium)MIF4GD (select the gene name)
Genetic variants : HAPMAP57409
Genomic Variants (DGV)MIF4GD [DGVbeta]
DECIPHER (Syndromes)17:73262310-73267311  ENSG00000125457
CONAN: Copy Number AnalysisMIF4GD 
Mutations
ICGC Data PortalMIF4GD 
TCGA Data PortalMIF4GD 
Broad Tumor PortalMIF4GD
OASIS PortalMIF4GD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMIF4GD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMIF4GD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MIF4GD
DgiDB (Drug Gene Interaction Database)MIF4GD
DoCM (Curated mutations)MIF4GD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MIF4GD (select a term)
intoGenMIF4GD
Cancer3DMIF4GD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612072   
Orphanet
MedgenMIF4GD
Genetic Testing Registry MIF4GD
NextProtA9UHW6 [Medical]
TSGene57409
GENETestsMIF4GD
Huge Navigator MIF4GD [HugePedia]
snp3D : Map Gene to Disease57409
BioCentury BCIQMIF4GD
ClinGenMIF4GD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57409
Chemical/Pharm GKB GenePA142671457
Clinical trialMIF4GD
Miscellaneous
canSAR (ICR)MIF4GD (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIF4GD
EVEXMIF4GD
GoPubMedMIF4GD
iHOPMIF4GD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:15:13 CET 2017

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