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MIGA1 (mitoguardin 1)

Identity

Alias_namesFAM73A
family with sequence similarity 73 member A
Alias_symbol (synonym)FLJ35093
Other alias
HGNC (Hugo) MIGA1
LocusID (NCBI) 374986
Atlas_Id 56064
Location 1p31.1  [Link to chromosome band 1p31]
Location_base_pair Starts at 77779624 and ends at 77879540 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIGA1   24741
Cards
Entrez_Gene (NCBI)MIGA1  374986  mitoguardin 1
AliasesFAM73A
GeneCards (Weizmann)MIGA1
Ensembl hg19 (Hinxton)ENSG00000180488 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180488 [Gene_View]  chr1:77779624-77879540 [Contig_View]  MIGA1 [Vega]
ICGC DataPortalENSG00000180488
TCGA cBioPortalMIGA1
AceView (NCBI)MIGA1
Genatlas (Paris)MIGA1
WikiGenes374986
SOURCE (Princeton)MIGA1
Genetics Home Reference (NIH)MIGA1
Genomic and cartography
GoldenPath hg38 (UCSC)MIGA1  -     chr1:77779624-77879540 +  1p31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIGA1  -     1p31.1   [Description]    (hg19-Feb_2009)
EnsemblMIGA1 - 1p31.1 [CytoView hg19]  MIGA1 - 1p31.1 [CytoView hg38]
Mapping of homologs : NCBIMIGA1 [Mapview hg19]  MIGA1 [Mapview hg38]
OMIM616773   
Gene and transcription
Genbank (Entrez)AK092412 AK296411 BC130387 BC144167 BX537792
RefSeq transcript (Entrez)NM_001270384 NM_198549
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIGA1
Cluster EST : UnigeneHs.437755 [ NCBI ]
CGAP (NCI)Hs.437755
Alternative Splicing GalleryENSG00000180488
Gene ExpressionMIGA1 [ NCBI-GEO ]   MIGA1 [ EBI - ARRAY_EXPRESS ]   MIGA1 [ SEEK ]   MIGA1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIGA1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)374986
GTEX Portal (Tissue expression)MIGA1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NAN2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NAN2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NAN2
Splice isoforms : SwissVarQ8NAN2
PhosPhoSitePlusQ8NAN2
Domains : Interpro (EBI)Miga   
Domain families : Pfam (Sanger)Miga (PF10265)   
Domain families : Pfam (NCBI)pfam10265   
Conserved Domain (NCBI)MIGA1
DMDM Disease mutations374986
Blocks (Seattle)MIGA1
SuperfamilyQ8NAN2
Human Protein AtlasENSG00000180488
Peptide AtlasQ8NAN2
HPRD13415
IPIIPI00845421   IPI00168047   IPI01015082   
Protein Interaction databases
DIP (DOE-UCLA)Q8NAN2
IntAct (EBI)Q8NAN2
FunCoupENSG00000180488
BioGRIDMIGA1
STRING (EMBL)MIGA1
ZODIACMIGA1
Ontologies - Pathways
QuickGOQ8NAN2
Ontology : AmiGOprotein binding  mitochondrial outer membrane  mitochondrial fusion  protein homodimerization activity  integral component of cell outer membrane  protein heterodimerization activity  
Ontology : EGO-EBIprotein binding  mitochondrial outer membrane  mitochondrial fusion  protein homodimerization activity  integral component of cell outer membrane  protein heterodimerization activity  
NDEx NetworkMIGA1
Atlas of Cancer Signalling NetworkMIGA1
Wikipedia pathwaysMIGA1
Orthology - Evolution
OrthoDB374986
GeneTree (enSembl)ENSG00000180488
Phylogenetic Trees/Animal Genes : TreeFamMIGA1
HOVERGENQ8NAN2
HOGENOMQ8NAN2
Homologs : HomoloGeneMIGA1
Homology/Alignments : Family Browser (UCSC)MIGA1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMIGA1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MIGA1
dbVarMIGA1
ClinVarMIGA1
1000_GenomesMIGA1 
Exome Variant ServerMIGA1
ExAC (Exome Aggregation Consortium)MIGA1 (select the gene name)
Genetic variants : HAPMAP374986
Genomic Variants (DGV)MIGA1 [DGVbeta]
DECIPHERMIGA1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMIGA1 
Mutations
ICGC Data PortalMIGA1 
TCGA Data PortalMIGA1 
Broad Tumor PortalMIGA1
OASIS PortalMIGA1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMIGA1
BioMutasearch MIGA1
DgiDB (Drug Gene Interaction Database)MIGA1
DoCM (Curated mutations)MIGA1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MIGA1 (select a term)
intoGenMIGA1
Cancer3DMIGA1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616773   
Orphanet
MedgenMIGA1
Genetic Testing Registry MIGA1
NextProtQ8NAN2 [Medical]
TSGene374986
GENETestsMIGA1
Target ValidationMIGA1
Huge Navigator MIGA1 [HugePedia]
snp3D : Map Gene to Disease374986
BioCentury BCIQMIGA1
ClinGenMIGA1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD374986
Chemical/Pharm GKB GenePA142671836
Clinical trialMIGA1
Miscellaneous
canSAR (ICR)MIGA1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIGA1
EVEXMIGA1
GoPubMedMIGA1
iHOPMIGA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:18:05 CEST 2017

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