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MIGA2 (mitoguardin 2)

Identity

Alias_namesC9orf54
FAM73B
chromosome 9 open reading frame 54
family with sequence similarity 73, member B
family with sequence similarity 73 member B
Alias_symbol (synonym)FLJ14596
FLJ00199
Other alias
HGNC (Hugo) MIGA2
LocusID (NCBI) 84895
Atlas_Id 56437
Location 9q34.11  [Link to chromosome band 9q34]
Location_base_pair Starts at 129036511 and ends at 129072082 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIGA2   23621
Cards
Entrez_Gene (NCBI)MIGA2  84895  mitoguardin 2
AliasesC9orf54; FAM73B
GeneCards (Weizmann)MIGA2
Ensembl hg19 (Hinxton)ENSG00000148343 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148343 [Gene_View]  chr9:129036511-129072082 [Contig_View]  MIGA2 [Vega]
ICGC DataPortalENSG00000148343
TCGA cBioPortalMIGA2
AceView (NCBI)MIGA2
Genatlas (Paris)MIGA2
WikiGenes84895
SOURCE (Princeton)MIGA2
Genetics Home Reference (NIH)MIGA2
Genomic and cartography
GoldenPath hg38 (UCSC)MIGA2  -     chr9:129036511-129072082 +  9q34.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIGA2  -     9q34.11   [Description]    (hg19-Feb_2009)
EnsemblMIGA2 - 9q34.11 [CytoView hg19]  MIGA2 - 9q34.11 [CytoView hg38]
Mapping of homologs : NCBIMIGA2 [Mapview hg19]  MIGA2 [Mapview hg38]
OMIM616774   
Gene and transcription
Genbank (Entrez)AJ420465 AK027502 AK054974 AK074127 AK075421
RefSeq transcript (Entrez)NM_001329990 NM_032809
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIGA2
Cluster EST : UnigeneHs.632693 [ NCBI ]
CGAP (NCI)Hs.632693
Alternative Splicing GalleryENSG00000148343
Gene ExpressionMIGA2 [ NCBI-GEO ]   MIGA2 [ EBI - ARRAY_EXPRESS ]   MIGA2 [ SEEK ]   MIGA2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIGA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84895
GTEX Portal (Tissue expression)MIGA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L4E1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L4E1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L4E1
Splice isoforms : SwissVarQ7L4E1
PhosPhoSitePlusQ7L4E1
Domains : Interpro (EBI)Miga   
Domain families : Pfam (Sanger)Miga (PF10265)   
Domain families : Pfam (NCBI)pfam10265   
Conserved Domain (NCBI)MIGA2
DMDM Disease mutations84895
Blocks (Seattle)MIGA2
SuperfamilyQ7L4E1
Human Protein AtlasENSG00000148343
Peptide AtlasQ7L4E1
HPRD12965
IPIIPI00926724   IPI00878608   IPI00646782   IPI00909206   IPI00877877   IPI00382514   IPI00745069   IPI00844024   IPI00893510   
Protein Interaction databases
DIP (DOE-UCLA)Q7L4E1
IntAct (EBI)Q7L4E1
FunCoupENSG00000148343
BioGRIDMIGA2
STRING (EMBL)MIGA2
ZODIACMIGA2
Ontologies - Pathways
QuickGOQ7L4E1
Ontology : AmiGOprotein binding  mitochondrial outer membrane  mitochondrial fusion  protein homodimerization activity  integral component of cell outer membrane  protein heterodimerization activity  bone development  
Ontology : EGO-EBIprotein binding  mitochondrial outer membrane  mitochondrial fusion  protein homodimerization activity  integral component of cell outer membrane  protein heterodimerization activity  bone development  
NDEx NetworkMIGA2
Atlas of Cancer Signalling NetworkMIGA2
Wikipedia pathwaysMIGA2
Orthology - Evolution
OrthoDB84895
GeneTree (enSembl)ENSG00000148343
Phylogenetic Trees/Animal Genes : TreeFamMIGA2
HOVERGENQ7L4E1
HOGENOMQ7L4E1
Homologs : HomoloGeneMIGA2
Homology/Alignments : Family Browser (UCSC)MIGA2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMIGA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MIGA2
dbVarMIGA2
ClinVarMIGA2
1000_GenomesMIGA2 
Exome Variant ServerMIGA2
ExAC (Exome Aggregation Consortium)MIGA2 (select the gene name)
Genetic variants : HAPMAP84895
Genomic Variants (DGV)MIGA2 [DGVbeta]
DECIPHERMIGA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMIGA2 
Mutations
ICGC Data PortalMIGA2 
TCGA Data PortalMIGA2 
Broad Tumor PortalMIGA2
OASIS PortalMIGA2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMIGA2
BioMutasearch MIGA2
DgiDB (Drug Gene Interaction Database)MIGA2
DoCM (Curated mutations)MIGA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MIGA2 (select a term)
intoGenMIGA2
Cancer3DMIGA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616774   
Orphanet
MedgenMIGA2
Genetic Testing Registry MIGA2
NextProtQ7L4E1 [Medical]
TSGene84895
GENETestsMIGA2
Target ValidationMIGA2
Huge Navigator MIGA2 [HugePedia]
snp3D : Map Gene to Disease84895
BioCentury BCIQMIGA2
ClinGenMIGA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84895
Chemical/Pharm GKB GenePA134896424
Clinical trialMIGA2
Miscellaneous
canSAR (ICR)MIGA2 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIGA2
EVEXMIGA2
GoPubMedMIGA2
iHOPMIGA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 25 19:18:05 CEST 2017

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