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MILR1 (mast cell immunoglobulin like receptor 1)

Identity

Alias_namesC17orf60
chromosome 17 open reading frame 60
mast cell immunoglobulin-like receptor 1
Alias_symbol (synonym)Allergin-1
MCA-32
Other aliasMCA32
HGNC (Hugo) MILR1
LocusID (NCBI) 284021
Atlas_Id 68987
Location 17q23.3  [Link to chromosome band 17q23]
Location_base_pair Starts at 64449115 and ends at 64468643 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MILR1 (17q23.3) / CFDP1 (16q23.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MILR1   27570
Cards
Entrez_Gene (NCBI)MILR1  284021  mast cell immunoglobulin like receptor 1
AliasesAllergin-1; C17orf60; MCA-32; MCA32
GeneCards (Weizmann)MILR1
Ensembl hg19 (Hinxton)ENSG00000271605 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000271605 [Gene_View]  chr17:64449115-64468643 [Contig_View]  MILR1 [Vega]
ICGC DataPortalENSG00000271605
TCGA cBioPortalMILR1
AceView (NCBI)MILR1
Genatlas (Paris)MILR1
WikiGenes284021
SOURCE (Princeton)MILR1
Genetics Home Reference (NIH)MILR1
Genomic and cartography
GoldenPath hg38 (UCSC)MILR1  -     chr17:64449115-64468643 +  17q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MILR1  -     17q23.3   [Description]    (hg19-Feb_2009)
EnsemblMILR1 - 17q23.3 [CytoView hg19]  MILR1 - 17q23.3 [CytoView hg38]
Mapping of homologs : NCBIMILR1 [Mapview hg19]  MILR1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB542950 AB542951 AB542952 BC014523 BC018972
RefSeq transcript (Entrez)NM_001085423 NM_001291316 NM_001291317
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MILR1
Cluster EST : UnigeneHs.631749 [ NCBI ]
CGAP (NCI)Hs.631749
Alternative Splicing GalleryENSG00000271605
Gene ExpressionMILR1 [ NCBI-GEO ]   MILR1 [ EBI - ARRAY_EXPRESS ]   MILR1 [ SEEK ]   MILR1 [ MEM ]
Gene Expression Viewer (FireBrowse)MILR1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284021
GTEX Portal (Tissue expression)MILR1
Human Protein AtlasENSG00000271605-MILR1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z6M3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z6M3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z6M3
Splice isoforms : SwissVarQ7Z6M3
PhosPhoSitePlusQ7Z6M3
Domains : Interpro (EBI)Allergin-1    Ig-like_dom    Ig-like_fold   
Domain families : Pfam (Sanger)Ig_2 (PF13895)   
Domain families : Pfam (NCBI)pfam13895   
Conserved Domain (NCBI)MILR1
DMDM Disease mutations284021
Blocks (Seattle)MILR1
SuperfamilyQ7Z6M3
Human Protein Atlas [tissue]ENSG00000271605-MILR1 [tissue]
Peptide AtlasQ7Z6M3
Protein Interaction databases
DIP (DOE-UCLA)Q7Z6M3
IntAct (EBI)Q7Z6M3
FunCoupENSG00000271605
BioGRIDMILR1
STRING (EMBL)MILR1
ZODIACMILR1
Ontologies - Pathways
QuickGOQ7Z6M3
Ontology : AmiGOintegral component of plasma membrane  negative regulation of mast cell activation  mast cell granule  mast cell degranulation  
Ontology : EGO-EBIintegral component of plasma membrane  negative regulation of mast cell activation  mast cell granule  mast cell degranulation  
NDEx NetworkMILR1
Atlas of Cancer Signalling NetworkMILR1
Wikipedia pathwaysMILR1
Orthology - Evolution
OrthoDB284021
GeneTree (enSembl)ENSG00000271605
Phylogenetic Trees/Animal Genes : TreeFamMILR1
HOVERGENQ7Z6M3
HOGENOMQ7Z6M3
Homologs : HomoloGeneMILR1
Homology/Alignments : Family Browser (UCSC)MILR1
Gene fusions - Rearrangements
Tumor Fusion PortalMILR1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMILR1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MILR1
dbVarMILR1
ClinVarMILR1
1000_GenomesMILR1 
Exome Variant ServerMILR1
ExAC (Exome Aggregation Consortium)ENSG00000271605
GNOMAD BrowserENSG00000271605
Genetic variants : HAPMAP284021
Genomic Variants (DGV)MILR1 [DGVbeta]
DECIPHERMILR1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMILR1 
Mutations
ICGC Data PortalMILR1 
TCGA Data PortalMILR1 
Broad Tumor PortalMILR1
OASIS PortalMILR1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMILR1
BioMutasearch MILR1
DgiDB (Drug Gene Interaction Database)MILR1
DoCM (Curated mutations)MILR1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MILR1 (select a term)
intoGenMILR1
Cancer3DMILR1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMILR1
MedgenMILR1
Genetic Testing Registry MILR1
NextProtQ7Z6M3 [Medical]
TSGene284021
GENETestsMILR1
Target ValidationMILR1
Huge Navigator MILR1 [HugePedia]
snp3D : Map Gene to Disease284021
BioCentury BCIQMILR1
ClinGenMILR1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284021
Chemical/Pharm GKB GenePA142672243
Clinical trialMILR1
Miscellaneous
canSAR (ICR)MILR1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMILR1
EVEXMILR1
GoPubMedMILR1
iHOPMILR1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 13:36:02 CET 2017

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