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MIPOL1 (mirror-image polydactyly 1)

Identity

Alias_symbol (synonym)CCDC193
Other alias
HGNC (Hugo) MIPOL1
LocusID (NCBI) 145282
Atlas_Id 51163
Location 14q13.3  [Link to chromosome band 14q13]
Location_base_pair Starts at 37197913 and ends at 37551259 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ACTR1A (10q24.32) / MIPOL1 (14q13.3)CDK14 (7q21.13) / MIPOL1 (14q13.3)DGKB (7p21.2) / MIPOL1 (14q13.3)
MIPOL1 (14q13.3) / ACTR1A (10q24.32)MIPOL1 (14q13.3) / DGKB (7p21.2)MIPOL1 (14q13.3) / EIF4G2 (11p15.3)
MIPOL1 (14q13.3) / ETV1 (7p21.2)MIPOL1 (14q13.3) / NPAS3 (14q13.1)PDE4A (19p13.2) / MIPOL1 (14q13.3)
PITX2 (4q25) / MIPOL1 (14q13.3)SLC25A21 (14q13.3) / MIPOL1 (14q13.3)SNX6 (14q13.1) / MIPOL1 (14q13.3)
SYNE2 (14q23.2) / MIPOL1 (14q13.3)TTC6 (14q21.1) / MIPOL1 (14q13.3)MIPOL1 14q13.3 / NPAS3 14q13.1
SLC25A21 14q13.3 / MIPOL1 14q13.3SNX6 14q13.1 / MIPOL1 14q13.3SYNE2 14q23.2 / MIPOL1 14q13.3
TTC6 14q21.1 / MIPOL1 14q13.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIPOL1   21460
Cards
Entrez_Gene (NCBI)MIPOL1  145282  mirror-image polydactyly 1
AliasesCCDC193
GeneCards (Weizmann)MIPOL1
Ensembl hg19 (Hinxton)ENSG00000151338 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000151338 [Gene_View]  chr14:37197913-37551259 [Contig_View]  MIPOL1 [Vega]
ICGC DataPortalENSG00000151338
TCGA cBioPortalMIPOL1
AceView (NCBI)MIPOL1
Genatlas (Paris)MIPOL1
WikiGenes145282
SOURCE (Princeton)MIPOL1
Genetics Home Reference (NIH)MIPOL1
Genomic and cartography
GoldenPath hg38 (UCSC)MIPOL1  -     chr14:37197913-37551259 +  14q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIPOL1  -     14q13.3   [Description]    (hg19-Feb_2009)
EnsemblMIPOL1 - 14q13.3 [CytoView hg19]  MIPOL1 - 14q13.3 [CytoView hg38]
Mapping of homologs : NCBIMIPOL1 [Mapview hg19]  MIPOL1 [Mapview hg38]
OMIM606850   
Gene and transcription
Genbank (Entrez)AK291850 AY059470 BC035870 BC036124 BC036523
RefSeq transcript (Entrez)NM_001195296 NM_001195297 NM_138731
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIPOL1
Cluster EST : UnigeneHs.660396 [ NCBI ]
CGAP (NCI)Hs.660396
Alternative Splicing GalleryENSG00000151338
Gene ExpressionMIPOL1 [ NCBI-GEO ]   MIPOL1 [ EBI - ARRAY_EXPRESS ]   MIPOL1 [ SEEK ]   MIPOL1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIPOL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)145282
GTEX Portal (Tissue expression)MIPOL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TD10   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TD10  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TD10
Splice isoforms : SwissVarQ8TD10
PhosPhoSitePlusQ8TD10
Domains : Interpro (EBI)MIPOL1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIPOL1
DMDM Disease mutations145282
Blocks (Seattle)MIPOL1
SuperfamilyQ8TD10
Human Protein AtlasENSG00000151338
Peptide AtlasQ8TD10
HPRD06029
IPIIPI00413518   IPI00473122   IPI00401800   IPI00640014   IPI01025542   IPI01024779   IPI01014832   
Protein Interaction databases
DIP (DOE-UCLA)Q8TD10
IntAct (EBI)Q8TD10
FunCoupENSG00000151338
BioGRIDMIPOL1
STRING (EMBL)MIPOL1
ZODIACMIPOL1
Ontologies - Pathways
QuickGOQ8TD10
Ontology : AmiGOprotein binding  nucleus  identical protein binding  
Ontology : EGO-EBIprotein binding  nucleus  identical protein binding  
NDEx NetworkMIPOL1
Atlas of Cancer Signalling NetworkMIPOL1
Wikipedia pathwaysMIPOL1
Orthology - Evolution
OrthoDB145282
GeneTree (enSembl)ENSG00000151338
Phylogenetic Trees/Animal Genes : TreeFamMIPOL1
HOVERGENQ8TD10
HOGENOMQ8TD10
Homologs : HomoloGeneMIPOL1
Homology/Alignments : Family Browser (UCSC)MIPOL1
Gene fusions - Rearrangements
Fusion: TCGAMIPOL1 14q13.3 NPAS3 14q13.1 LUAD
Fusion: TCGASLC25A21 14q13.3 MIPOL1 14q13.3 LUAD
Fusion: TCGASNX6 14q13.1 MIPOL1 14q13.3 LUAD
Fusion: TCGASYNE2 14q23.2 MIPOL1 14q13.3 BRCA
Fusion: TCGATTC6 14q21.1 MIPOL1 14q13.3 BRCA LUSC PRAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMIPOL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MIPOL1
dbVarMIPOL1
ClinVarMIPOL1
1000_GenomesMIPOL1 
Exome Variant ServerMIPOL1
ExAC (Exome Aggregation Consortium)MIPOL1 (select the gene name)
Genetic variants : HAPMAP145282
Genomic Variants (DGV)MIPOL1 [DGVbeta]
DECIPHERMIPOL1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMIPOL1 
Mutations
ICGC Data PortalMIPOL1 
TCGA Data PortalMIPOL1 
Broad Tumor PortalMIPOL1
OASIS PortalMIPOL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMIPOL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMIPOL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MIPOL1
DgiDB (Drug Gene Interaction Database)MIPOL1
DoCM (Curated mutations)MIPOL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MIPOL1 (select a term)
intoGenMIPOL1
Cancer3DMIPOL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606850   
Orphanet
MedgenMIPOL1
Genetic Testing Registry MIPOL1
NextProtQ8TD10 [Medical]
TSGene145282
GENETestsMIPOL1
Target ValidationMIPOL1
Huge Navigator MIPOL1 [HugePedia]
snp3D : Map Gene to Disease145282
BioCentury BCIQMIPOL1
ClinGenMIPOL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD145282
Chemical/Pharm GKB GenePA134883770
Clinical trialMIPOL1
Miscellaneous
canSAR (ICR)MIPOL1 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIPOL1
EVEXMIPOL1
GoPubMedMIPOL1
iHOPMIPOL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:43:05 CEST 2017

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