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MIR1229 (microRNA 1229)

Identity

Other aliasMIRN1229
hsa-mir-1229
HGNC (Hugo) MIR1229
LocusID (NCBI) 100302156
Atlas_Id 57363
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 179798278 and ends at 179798346 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR1229   33924
Cards
Entrez_Gene (NCBI)MIR1229  100302156  microRNA 1229
AliasesMIRN1229; hsa-mir-1229
GeneCards (Weizmann)MIR1229
Ensembl hg19 (Hinxton)ENSG00000221394 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221394 [Gene_View]  ENSG00000221394 [Sequence]  chr5:179798278-179798346 [Contig_View]  MIR1229 [Vega]
ICGC DataPortalENSG00000221394
TCGA cBioPortalMIR1229
AceView (NCBI)MIR1229
Genatlas (Paris)MIR1229
WikiGenes100302156
SOURCE (Princeton)MIR1229
Genetics Home Reference (NIH)MIR1229
miRBaseMIR1229
dbDEMCMIR1229
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1229  -     chr5:179798278-179798346 -  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1229  -     5q35.3   [Description]    (hg19-Feb_2009)
MIR1229 - 5q35.3 [CytoView hg19]  MIR1229 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIMIR1229 [Mapview hg19]  MIR1229 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1229
Alternative Splicing GalleryENSG00000221394
Gene ExpressionMIR1229 [ NCBI-GEO ]   MIR1229 [ EBI - ARRAY_EXPRESS ]   MIR1229 [ SEEK ]   MIR1229 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1229 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302156
GTEX Portal (Tissue expression)MIR1229
Human Protein AtlasENSG00000221394-MIR1229 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1229
DMDM Disease mutations100302156
Blocks (Seattle)MIR1229
Human Protein Atlas [tissue]ENSG00000221394-MIR1229 [tissue]
Protein Interaction databases
FunCoupENSG00000221394
BioGRIDMIR1229
STRING (EMBL)MIR1229
ZODIACMIR1229
Ontologies - Pathways
Huge Navigator MIR1229 [HugePedia]
snp3D : Map Gene to Disease100302156
BioCentury BCIQMIR1229
ClinGenMIR1229
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302156
Chemical/Pharm GKB GenePA164722372
Clinical trialMIR1229
Miscellaneous
canSAR (ICR)MIR1229 (select the gene name)
DataMed IndexMIR1229
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1229
EVEXMIR1229
GoPubMedMIR1229
iHOPMIR1229
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu May 2 12:58:02 CEST 2019

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