Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR1236 (microRNA 1236)

Identity

Alias_namesMIRN1236
Alias_symbol (synonym)hsa-mir-1236
Other alias
HGNC (Hugo) MIR1236
LocusID (NCBI) 100302242
Atlas_Id 54989
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 31956839 and ends at 31956940 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR1236   33925
Cards
Entrez_Gene (NCBI)MIR1236  100302242  microRNA 1236
AliasesMIRN1236; hsa-mir-1236
GeneCards (Weizmann)MIR1236
Ensembl hg19 (Hinxton)ENSG00000284446 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000284446 [Gene_View]  ENSG00000284446 [Sequence]  chr6:31956839-31956940 [Contig_View]  MIR1236 [Vega]
ICGC DataPortalENSG00000284446
TCGA cBioPortalMIR1236
AceView (NCBI)MIR1236
Genatlas (Paris)MIR1236
WikiGenes100302242
SOURCE (Princeton)MIR1236
Genetics Home Reference (NIH)MIR1236
miRBaseMIR1236
dbDEMCMIR1236
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1236  -     chr6:31956839-31956940 -  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1236  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblMIR1236 - 6p21.33 [CytoView hg19]  MIR1236 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBIMIR1236 [Mapview hg19]  MIR1236 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NG_032652 NT_167245 NT_167247 NT_167248 NT_167249
Consensus coding sequences : CCDS (NCBI)MIR1236
Alternative Splicing GalleryENSG00000284446
Gene ExpressionMIR1236 [ NCBI-GEO ]   MIR1236 [ EBI - ARRAY_EXPRESS ]   MIR1236 [ SEEK ]   MIR1236 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1236 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302242
GTEX Portal (Tissue expression)MIR1236
Human Protein AtlasENSG00000284446-MIR1236 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1236
DMDM Disease mutations100302242
Blocks (Seattle)MIR1236
Human Protein Atlas [tissue]ENSG00000284446-MIR1236 [tissue]
Protein Interaction databases
FunCoupENSG00000284446
BioGRIDMIR1236
STRING (EMBL)MIR1236
ZODIACMIR1236
Ontologies - Pathways
Huge Navigator MIR1236 [HugePedia]
snp3D : Map Gene to Disease100302242
BioCentury BCIQMIR1236
ClinGenMIR1236
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302242
Chemical/Pharm GKB GenePA164722376
Clinical trialMIR1236
Miscellaneous
canSAR (ICR)MIR1236 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1236
EVEXMIR1236
GoPubMedMIR1236
iHOPMIR1236
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:20:16 CET 2018

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