Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR1258 (microRNA 1258)

Identity

Alias_namesMIRN1258
Alias_symbol (synonym)hsa-mir-1258
Other aliasmir-1258
HGNC (Hugo) MIR1258
LocusID (NCBI) 100302172
Atlas_Id 53677
Location 2q31.3  [Link to chromosome band 2q31]
Location_base_pair Starts at 179860836 and ends at 179860908 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR1258   35323
Cards
Entrez_Gene (NCBI)MIR1258  100302172  microRNA 1258
AliasesMIRN1258; hsa-mir-1258; mir-1258
GeneCards (Weizmann)MIR1258
Ensembl hg19 (Hinxton)ENSG00000221240 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221240 [Gene_View]  chr2:179860836-179860908 [Contig_View]  MIR1258 [Vega]
ICGC DataPortalENSG00000221240
TCGA cBioPortalMIR1258
AceView (NCBI)MIR1258
Genatlas (Paris)MIR1258
WikiGenes100302172
SOURCE (Princeton)MIR1258
Genetics Home Reference (NIH)MIR1258
miRBaseMIR1258
dbDEMCMIR1258
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1258  -     chr2:179860836-179860908 -  2q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1258  -     2q31.3   [Description]    (hg19-Feb_2009)
EnsemblMIR1258 - 2q31.3 [CytoView hg19]  MIR1258 - 2q31.3 [CytoView hg38]
Mapping of homologs : NCBIMIR1258 [Mapview hg19]  MIR1258 [Mapview hg38]
OMIM614488   
Gene and transcription
Genbank (Entrez)LM610150
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1258
Alternative Splicing GalleryENSG00000221240
Gene ExpressionMIR1258 [ NCBI-GEO ]   MIR1258 [ EBI - ARRAY_EXPRESS ]   MIR1258 [ SEEK ]   MIR1258 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1258 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302172
GTEX Portal (Tissue expression)MIR1258
Human Protein AtlasENSG00000221240-MIR1258 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1258
DMDM Disease mutations100302172
Blocks (Seattle)MIR1258
Human Protein Atlas [tissue]ENSG00000221240-MIR1258 [tissue]
Protein Interaction databases
FunCoupENSG00000221240
BioGRIDMIR1258
STRING (EMBL)MIR1258
ZODIACMIR1258
Ontologies - Pathways
Huge Navigator MIR1258 [HugePedia]
snp3D : Map Gene to Disease100302172
BioCentury BCIQMIR1258
ClinGenMIR1258
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302172
Chemical/Pharm GKB GenePA164722399
Clinical trialMIR1258
Miscellaneous
canSAR (ICR)MIR1258 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1258
EVEXMIR1258
GoPubMedMIR1258
iHOPMIR1258
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:22:37 CET 2017

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