Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR1260B (microRNA 1260b)

Identity

Alias_symbol (synonym)hsa-mir-1260b
Other aliasmir-1260b
HGNC (Hugo) MIR1260B
LocusID (NCBI) 100422991
Atlas_Id 53492
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 96341438 and ends at 96341526 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR1260B   38258
Cards
Entrez_Gene (NCBI)MIR1260B  100422991  microRNA 1260b
Aliasesmir-1260b
GeneCards (Weizmann)MIR1260B
Ensembl hg19 (Hinxton)ENSG00000266192 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000266192 [Gene_View]  ENSG00000266192 [Sequence]  chr11:96341438-96341526 [Contig_View]  MIR1260B [Vega]
ICGC DataPortalENSG00000266192
TCGA cBioPortalMIR1260B
AceView (NCBI)MIR1260B
Genatlas (Paris)MIR1260B
WikiGenes100422991
SOURCE (Princeton)MIR1260B
Genetics Home Reference (NIH)MIR1260B
miRBaseMIR1260B
dbDEMCMIR1260B
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1260B  -     chr11:96341438-96341526 +  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1260B  -     11q21   [Description]    (hg19-Feb_2009)
EnsemblMIR1260B - 11q21 [CytoView hg19]  MIR1260B - 11q21 [CytoView hg38]
Mapping of homologs : NCBIMIR1260B [Mapview hg19]  MIR1260B [Mapview hg38]
OMIM615372   
Gene and transcription
Genbank (Entrez)LM611021
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1260B
Alternative Splicing GalleryENSG00000266192
Gene ExpressionMIR1260B [ NCBI-GEO ]   MIR1260B [ EBI - ARRAY_EXPRESS ]   MIR1260B [ SEEK ]   MIR1260B [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1260B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422991
GTEX Portal (Tissue expression)MIR1260B
Human Protein AtlasENSG00000266192-MIR1260B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1260B
DMDM Disease mutations100422991
Blocks (Seattle)MIR1260B
Human Protein Atlas [tissue]ENSG00000266192-MIR1260B [tissue]
Protein Interaction databases
FunCoupENSG00000266192
BioGRIDMIR1260B
STRING (EMBL)MIR1260B
ZODIACMIR1260B
Ontologies - Pathways
Huge Navigator MIR1260B [HugePedia]
snp3D : Map Gene to Disease100422991
BioCentury BCIQMIR1260B
ClinGenMIR1260B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422991
Chemical/Pharm GKB GenePA165543463
Clinical trialMIR1260B
Miscellaneous
canSAR (ICR)MIR1260B (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1260B
EVEXMIR1260B
GoPubMedMIR1260B
iHOPMIR1260B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 27 11:35:34 CEST 2018
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