Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR1272 (microRNA 1272)

Identity

Alias (NCBI)MIRN1272
hsa-mir-1272
mir-1272
HGNC (Hugo) MIR1272
HGNC Alias symbhsa-mir-1272
HGNC Previous nameMIRN1272
LocusID (NCBI) 100302184
Atlas_Id 69048
Location 15q22.31  [Link to chromosome band 15q22]
Location_base_pair Starts at 64762387 and ends at 64762515 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR1272   35339
Cards
Entrez_Gene (NCBI)MIR1272  100302184  microRNA 1272
AliasesMIRN1272; hsa-mir-1272; mir-1272
GeneCards (Weizmann)MIR1272
Ensembl hg19 (Hinxton)ENSG00000221033 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221033 [Gene_View]  ENSG00000221033 [Sequence]  chr15:64762387-64762515 [Contig_View]  MIR1272 [Vega]
ICGC DataPortalENSG00000221033
TCGA cBioPortalMIR1272
AceView (NCBI)MIR1272
Genatlas (Paris)MIR1272
WikiGenes100302184
SOURCE (Princeton)MIR1272
Genetics Home Reference (NIH)MIR1272
miRBaseMIR1272
dbDEMCMIR1272
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1272  -     chr15:64762387-64762515 -  15q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1272  -     15q22.31   [Description]    (hg19-Feb_2009)
GoldenPathMIR1272 - 15q22.31 [CytoView hg19]  MIR1272 - 15q22.31 [CytoView hg38]
ImmunoBaseENSG00000221033
genome Data Viewer NCBIMIR1272 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)LM610160
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1272
Alternative Splicing GalleryENSG00000221033
Gene ExpressionMIR1272 [ NCBI-GEO ]   MIR1272 [ EBI - ARRAY_EXPRESS ]   MIR1272 [ SEEK ]   MIR1272 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1272 [ Firebrowse - Broad ]
GenevisibleExpression of MIR1272 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100302184
GTEX Portal (Tissue expression)MIR1272
Human Protein AtlasENSG00000221033-MIR1272 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1272
DMDM Disease mutations100302184
Blocks (Seattle)MIR1272
Human Protein Atlas [tissue]ENSG00000221033-MIR1272 [tissue]
Protein Interaction databases
FunCoupENSG00000221033
BioGRIDMIR1272
STRING (EMBL)MIR1272
ZODIACMIR1272
Ontologies - Pathways
Huge Navigator MIR1272 [HugePedia]
snp3D : Map Gene to Disease100302184
BioCentury BCIQMIR1272
ClinGenMIR1272
Clinical trials, drugs, therapy
Protein Interactions : CTD100302184
Pharm GKB GenePA164722418
Clinical trialMIR1272
Miscellaneous
canSAR (ICR)MIR1272 (select the gene name)
HarmonizomeMIR1272
DataMed IndexMIR1272
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1272
EVEXMIR1272
GoPubMedMIR1272
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:13:57 CEST 2020

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