Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR1273E (microRNA 1273e)

Identity

Other aliashsa-mir-1273e
HGNC (Hugo) MIR1273E
LocusID (NCBI) 100526648
Atlas_Id 76968
Location 17q23.3  [Link to chromosome band 17q23]
Location_base_pair Starts at 64425069 and ends at 64425170 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR1273E   50833
Cards
Entrez_Gene (NCBI)MIR1273E  100526648  microRNA 1273e
Aliaseshsa-mir-1273e
GeneCards (Weizmann)MIR1273E
Ensembl hg19 (Hinxton)ENSG00000265031 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265031 [Gene_View]  chr17:64425069-64425170 [Contig_View]  MIR1273E [Vega]
ICGC DataPortalENSG00000265031
TCGA cBioPortalMIR1273E
AceView (NCBI)MIR1273E
Genatlas (Paris)MIR1273E
WikiGenes100526648
SOURCE (Princeton)MIR1273E
Genetics Home Reference (NIH)MIR1273E
miRBaseMIR1273E
dbDEMCMIR1273E
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1273E  -     chr17:64425069-64425170 -  17q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1273E  -     17q23.3   [Description]    (hg19-Feb_2009)
EnsemblMIR1273E - 17q23.3 [CytoView hg19]  MIR1273E - 17q23.3 [CytoView hg38]
Mapping of homologs : NCBIMIR1273E [Mapview hg19]  MIR1273E [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1273E
Alternative Splicing GalleryENSG00000265031
Gene ExpressionMIR1273E [ NCBI-GEO ]   MIR1273E [ EBI - ARRAY_EXPRESS ]   MIR1273E [ SEEK ]   MIR1273E [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1273E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100526648
GTEX Portal (Tissue expression)MIR1273E
Human Protein AtlasENSG00000265031-MIR1273E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1273E
DMDM Disease mutations100526648
Blocks (Seattle)MIR1273E
Human Protein Atlas [tissue]ENSG00000265031-MIR1273E [tissue]
Protein Interaction databases
FunCoupENSG00000265031
BioGRIDMIR1273E
STRING (EMBL)MIR1273E
ZODIACMIR1273E
Ontologies - Pathways
Huge Navigator MIR1273E [HugePedia]
snp3D : Map Gene to Disease100526648
BioCentury BCIQMIR1273E
ClinGenMIR1273E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100526648
Clinical trialMIR1273E
Miscellaneous
canSAR (ICR)MIR1273E (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1273E
EVEXMIR1273E
GoPubMedMIR1273E
iHOPMIR1273E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Feb 23 18:39:46 CET 2018
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.