Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR1275 (microRNA 1275)

Identity

Other aliasMIRN1275
hsa-mir-1275
mir-1275
HGNC (Hugo) MIR1275
LocusID (NCBI) 100302123
Atlas_Id 57380
Location 6p21.31  [Link to chromosome band 6p21]
Location_base_pair Starts at 33999972 and ends at 34000051 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR1275   35346
Cards
Entrez_Gene (NCBI)MIR1275  100302123  microRNA 1275
AliasesMIRN1275; hsa-mir-1275; mir-1275
GeneCards (Weizmann)MIR1275
Ensembl hg19 (Hinxton)ENSG00000221697 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221697 [Gene_View]  ENSG00000221697 [Sequence]  chr6:33999972-34000051 [Contig_View]  MIR1275 [Vega]
ICGC DataPortalENSG00000221697
TCGA cBioPortalMIR1275
AceView (NCBI)MIR1275
Genatlas (Paris)MIR1275
WikiGenes100302123
SOURCE (Princeton)MIR1275
Genetics Home Reference (NIH)MIR1275
miRBaseMIR1275
dbDEMCMIR1275
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1275  -     chr6:33999972-34000051 -  6p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1275  -     6p21.31   [Description]    (hg19-Feb_2009)
EnsemblMIR1275 - 6p21.31 [CytoView hg19]  MIR1275 - 6p21.31 [CytoView hg38]
Mapping of homologs : NCBIMIR1275 [Mapview hg19]  MIR1275 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM610165
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1275
Alternative Splicing GalleryENSG00000221697
Gene ExpressionMIR1275 [ NCBI-GEO ]   MIR1275 [ EBI - ARRAY_EXPRESS ]   MIR1275 [ SEEK ]   MIR1275 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1275 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302123
GTEX Portal (Tissue expression)MIR1275
Human Protein AtlasENSG00000221697-MIR1275 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1275
DMDM Disease mutations100302123
Blocks (Seattle)MIR1275
Human Protein Atlas [tissue]ENSG00000221697-MIR1275 [tissue]
Protein Interaction databases
FunCoupENSG00000221697
BioGRIDMIR1275
STRING (EMBL)MIR1275
ZODIACMIR1275
Ontologies - Pathways
Huge Navigator MIR1275 [HugePedia]
snp3D : Map Gene to Disease100302123
BioCentury BCIQMIR1275
ClinGenMIR1275
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302123
Chemical/Pharm GKB GenePA164722422
Clinical trialMIR1275
Miscellaneous
canSAR (ICR)MIR1275 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1275
EVEXMIR1275
GoPubMedMIR1275
iHOPMIR1275
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:20:22 CET 2018

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