Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR1302-5 (microRNA 1302-5)

Identity

Alias (NCBI)MIRN1302-5
hsa-mir-1302-5
HGNC (Hugo) MIR1302-5
HGNC Alias symbhsa-mir-1302-5
HGNC Previous nameMIRN1302-5
LocusID (NCBI) 100302146
Atlas_Id 76937
Location 20q13.13  [Link to chromosome band 20q13]
Location_base_pair Starts at 50614636 and ends at 50614785 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR1302-5   35297
Cards
Entrez_Gene (NCBI)MIR1302-5  100302146  microRNA 1302-5
AliasesMIRN1302-5; hsa-mir-1302-5
GeneCards (Weizmann)MIR1302-5
Ensembl hg19 (Hinxton)ENSG00000221091 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221091 [Gene_View]  ENSG00000221091 [Sequence]  chr20:50614636-50614785 [Contig_View]  MIR1302-5 [Vega]
ICGC DataPortalENSG00000221091
TCGA cBioPortalMIR1302-5
AceView (NCBI)MIR1302-5
Genatlas (Paris)MIR1302-5
WikiGenes100302146
SOURCE (Princeton)MIR1302-5
Genetics Home Reference (NIH)MIR1302-5
miRBaseMIR1302-5
dbDEMCMIR1302-5
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1302-5  -     chr20:50614636-50614785 -  20q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1302-5  -     20q13.13   [Description]    (hg19-Feb_2009)
GoldenPathMIR1302-5 - 20q13.13 [CytoView hg19]  MIR1302-5 - 20q13.13 [CytoView hg38]
ImmunoBaseENSG00000221091
genome Data Viewer NCBIMIR1302-5 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1302-5
Alternative Splicing GalleryENSG00000221091
Gene ExpressionMIR1302-5 [ NCBI-GEO ]   MIR1302-5 [ EBI - ARRAY_EXPRESS ]   MIR1302-5 [ SEEK ]   MIR1302-5 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1302-5 [ Firebrowse - Broad ]
GenevisibleExpression of MIR1302-5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100302146
GTEX Portal (Tissue expression)MIR1302-5
Human Protein AtlasENSG00000221091-MIR1302-5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1302-5
DMDM Disease mutations100302146
Blocks (Seattle)MIR1302-5
Human Protein Atlas [tissue]ENSG00000221091-MIR1302-5 [tissue]
Protein Interaction databases
FunCoupENSG00000221091
BioGRIDMIR1302-5
STRING (EMBL)MIR1302-5
ZODIACMIR1302-5
Ontologies - Pathways
Huge Navigator MIR1302-5 [HugePedia]
snp3D : Map Gene to Disease100302146
BioCentury BCIQMIR1302-5
ClinGenMIR1302-5
Clinical trials, drugs, therapy
Protein Interactions : CTD100302146
Pharm GKB GenePA164722460
Clinical trialMIR1302-5
Miscellaneous
canSAR (ICR)MIR1302-5 (select the gene name)
HarmonizomeMIR1302-5
DataMed IndexMIR1302-5
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1302-5
EVEXMIR1302-5
GoPubMedMIR1302-5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:14:01 CEST 2020

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