Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR130B (microRNA 130b)

Identity

Alias_namesMIRN130B
Alias_symbol (synonym)hsa-mir-130b
Other aliasmir-130b
HGNC (Hugo) MIR130B
LocusID (NCBI) 406920
Atlas_Id 52426
Location 22q11.21  [Link to chromosome band 22q11]
Location_base_pair Starts at 21653304 and ends at 21653385 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR130B   31515
Cards
Entrez_Gene (NCBI)MIR130B  406920  microRNA 130b
AliasesMIRN130B; mir-130b
GeneCards (Weizmann)MIR130B
Ensembl hg19 (Hinxton)ENSG00000283871 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000283871 [Gene_View]  ENSG00000283871 [Sequence]  chr22:21653304-21653385 [Contig_View]  MIR130B [Vega]
ICGC DataPortalENSG00000283871
TCGA cBioPortalMIR130B
AceView (NCBI)MIR130B
Genatlas (Paris)MIR130B
WikiGenes406920
SOURCE (Princeton)MIR130B
Genetics Home Reference (NIH)MIR130B
miRBaseMIR130B
dbDEMCMIR130B
Genomic and cartography
GoldenPath hg38 (UCSC)MIR130B  -     chr22:21653304-21653385 +  22q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR130B  -     22q11.21   [Description]    (hg19-Feb_2009)
EnsemblMIR130B - 22q11.21 [CytoView hg19]  MIR130B - 22q11.21 [CytoView hg38]
Mapping of homologs : NCBIMIR130B [Mapview hg19]  MIR130B [Mapview hg38]
OMIM613682   
Gene and transcription
Genbank (Entrez)AJ550406 LM608675
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR130B
Alternative Splicing GalleryENSG00000283871
Gene ExpressionMIR130B [ NCBI-GEO ]   MIR130B [ EBI - ARRAY_EXPRESS ]   MIR130B [ SEEK ]   MIR130B [ MEM ]
Gene Expression Viewer (FireBrowse)MIR130B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406920
GTEX Portal (Tissue expression)MIR130B
Human Protein AtlasENSG00000283871-MIR130B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR130B
DMDM Disease mutations406920
Blocks (Seattle)MIR130B
Human Protein Atlas [tissue]ENSG00000283871-MIR130B [tissue]
Protein Interaction databases
FunCoupENSG00000283871
BioGRIDMIR130B
STRING (EMBL)MIR130B
ZODIACMIR130B
Ontologies - Pathways
Huge Navigator MIR130B [HugePedia]
snp3D : Map Gene to Disease406920
BioCentury BCIQMIR130B
ClinGenMIR130B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406920
Chemical/Pharm GKB GenePA164722471
Clinical trialMIR130B
Miscellaneous
canSAR (ICR)MIR130B (select the gene name)
Probes
Litterature
PubMed63 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR130B
EVEXMIR130B
GoPubMedMIR130B
iHOPMIR130B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:20:30 CET 2018
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