Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR138-2 (microRNA 138-2)

Identity

Other namesMIRN138-2
HGNC (Hugo) MIR138-2
LocusID (NCBI) 406930
Location 16q13
Location_base_pair Starts at 56892430 and ends at 56892513 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)MIR138-2   31525
Entrez_Gene (NCBI)MIR138-2  406930  microRNA 138-2
Cards
GeneCards (Weizmann)MIR138-2
Ensembl (Hinxton) [Gene_View]  chr16:56892430-56892513 [Contig_View]  MIR138-2 [Vega]
AceView (NCBI)MIR138-2
Genatlas (Paris)MIR138-2
SOURCE (Stanford)
Genomic and cartography
GoldenPath (UCSC)MIR138-2  -  16q13   chr16:56892430-56892513 +  16q13   [Description]    (hg19-Feb_2009)
EnsemblMIR138-2 - 16q13 [CytoView]
Mapping of homologs : NCBIMIR138-2 [Mapview]
OMIM613395   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (SRS)
RefSeq transcript (Entrez)
RefSeq genomic (SRS)AC_000148 NC_000016 NC_018927 NT_010498 NW_001838290 NW_004078087
RefSeq genomic (Entrez)AC_000148 NC_000016 NC_018927 NT_010498 NW_001838290 NW_004078087
Consensus coding sequences : CCDS (NCBI)MIR138-2
Alternative Splicing : Fast-db (Paris)GSHG0041581
Gene ExpressionMIR138-2 [ NCBI-GEO ]   MIR138-2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM406930
Protein Interaction databases
REACTOMEMIR138-2
Protein Interaction Database406930
BioGRIDMIR138-2
IntegromeDBMIR138-2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MIR138-2
SNP (GeneSNP Utah)MIR138-2
SNP : HGBaseMIR138-2
Genetic variants : HAPMAPMIR138-2
Mutations and Diseases : HGMDMIR138-2
OMIM613395   
GENETests613395   
Disease Genetic AssociationMIR138-2
Huge Navigator MIR138-2 [HugePedia]  MIR138-2 [HugeCancerGEM]
Genomic VariantsMIR138-2  MIR138-2 [DGVbeta]
snp3D : Map Gene to Disease406930
General knowledge
Homologs : HomoloGeneMIR138-2
Homology/Alignments : Family Browser (UCSC)MIR138-2
Phylogenetic Trees/Animal Genes : TreeFamMIR138-2
Chemical/Protein Interactions : CTD406930
Chemical/Pharm GKB GenePA164722487
Clinical trialMIR138-2
Ontology : AmiGO
Ontology : EGO-EBI
Other databases
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
PubGeneMIR138-2
iHOPMIR138-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:41:26 CEST 2013
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