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MIR139 (microRNA 139)

Identity

Alias (NCBI)MIR139-3p
MIRN139
mir-139
HGNC (Hugo) MIR139
HGNC Alias symbhsa-mir-139
HGNC Previous nameMIRN139
LocusID (NCBI) 406931
Atlas_Id 52082
Location 11q13.4  [Link to chromosome band 11q13]
Location_base_pair Starts at 72615063 and ends at 72615130 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR139   31526
Cards
Entrez_Gene (NCBI)MIR139    microRNA 139
AliasesMIR139-3p; MIRN139; mir-139
GeneCards (Weizmann)MIR139
Ensembl hg19 (Hinxton)ENSG00000272036 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000272036 [Gene_View]  ENSG00000272036 [Sequence]  chr11:72615063-72615130 [Contig_View]  MIR139 [Vega]
ICGC DataPortalENSG00000272036
TCGA cBioPortalMIR139
AceView (NCBI)MIR139
Genatlas (Paris)MIR139
SOURCE (Princeton)MIR139
Genetics Home Reference (NIH)MIR139
miRBaseMIR139
dbDEMCMIR139
Genomic and cartography
GoldenPath hg38 (UCSC)MIR139  -     chr11:72615063-72615130 -  11q13.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR139  -     11q13.4   [Description]    (hg19-Feb_2009)
GoldenPathMIR139 - 11q13.4 [CytoView hg19]  MIR139 - 11q13.4 [CytoView hg38]
ImmunoBaseENSG00000272036
genome Data Viewer NCBIMIR139 [Mapview hg19]  
OMIM615017   
Gene and transcription
Genbank (Entrez)LM608336
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR139
Alternative Splicing GalleryENSG00000272036
Gene ExpressionMIR139 [ NCBI-GEO ]   MIR139 [ EBI - ARRAY_EXPRESS ]   MIR139 [ SEEK ]   MIR139 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR139 [ Firebrowse - Broad ]
GenevisibleExpression of MIR139 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)406931
GTEX Portal (Tissue expression)MIR139
Human Protein AtlasENSG00000272036-MIR139 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR139
Blocks (Seattle)MIR139
Human Protein Atlas [tissue]ENSG00000272036-MIR139 [tissue]
Protein Interaction databases
BioGRIDMIR139
STRING (EMBL)MIR139
ZODIACMIR139
Ontologies - Pathways
Litterature
PubMed120 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMIR139
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jan 1 18:25:13 CET 2021

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