Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR146A (microRNA 146a)

Identity

Alias_namesMIRN146
MIRN146A
microRNA 146
Alias_symbol (synonym)hsa-mir-146
hsa-mir-146a
Other aliasmiR-146a
miRNA146A
HGNC (Hugo) MIR146A
LocusID (NCBI) 406938
Atlas_Id 50195
Location 5q33.3  [Link to chromosome band 5q33]
Location_base_pair Starts at 160485352 and ends at 160485450 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  Classification of myelodysplastic syndromes 2015

External links

Nomenclature
HGNC (Hugo)MIR146A   31533
Cards
Entrez_Gene (NCBI)MIR146A  406938  microRNA 146a
AliasesMIRN146; MIRN146A; miR-146a; miRNA146A
GeneCards (Weizmann)MIR146A
Ensembl hg19 (Hinxton)ENSG00000283733 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000283733 [Gene_View]  ENSG00000283733 [Sequence]  chr5:160485352-160485450 [Contig_View]  MIR146A [Vega]
ICGC DataPortalENSG00000283733
TCGA cBioPortalMIR146A
AceView (NCBI)MIR146A
Genatlas (Paris)MIR146A
WikiGenes406938
SOURCE (Princeton)MIR146A
Genetics Home Reference (NIH)MIR146A
miRBaseMIR146A
dbDEMCMIR146A
Genomic and cartography
GoldenPath hg38 (UCSC)MIR146A  -     chr5:160485352-160485450 +  5q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR146A  -     5q33.3   [Description]    (hg19-Feb_2009)
GoldenPathMIR146A - 5q33.3 [CytoView hg19]  MIR146A - 5q33.3 [CytoView hg38]
Genome Data Viewer NCBIMIR146A [Mapview hg19]  
OMIM610566   
Gene and transcription
Genbank (Entrez)LM608517
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR146A
Alternative Splicing GalleryENSG00000283733
Gene ExpressionMIR146A [ NCBI-GEO ]   MIR146A [ EBI - ARRAY_EXPRESS ]   MIR146A [ SEEK ]   MIR146A [ MEM ]
Gene Expression Viewer (FireBrowse)MIR146A [ Firebrowse - Broad ]
GenevisibleExpression of MIR146A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)406938
GTEX Portal (Tissue expression)MIR146A
Human Protein AtlasENSG00000283733-MIR146A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR146A
DMDM Disease mutations406938
Human Protein Atlas [tissue]ENSG00000283733-MIR146A [tissue]
Protein Interaction databases
FunCoupENSG00000283733
BioGRIDMIR146A
STRING (EMBL)MIR146A
ZODIACMIR146A
Ontologies - Pathways
snp3D : Map Gene to Disease406938
BioCentury BCIQMIR146A
ClinGenMIR146A
Clinical trials, drugs, therapy
Protein Interactions : CTD406938
Pharm GKB GenePA164722497
Clinical trialMIR146A
Miscellaneous
canSAR (ICR)MIR146A (select the gene name)
HarmonizomeMIR146A
DataMed IndexMIR146A
Probes
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR146A
EVEXMIR146A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Jul 11 19:58:27 CEST 2020
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