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MIR149 (microRNA 149)

Identity

Alias_namesMIRN149
Alias_symbol (synonym)hsa-mir-149
Other aliasmir-149
HGNC (Hugo) MIR149
LocusID (NCBI) 406941
Atlas_Id 52414
Location 2q37.3  [Link to chromosome band 2q37]
Location_base_pair Starts at 240456001 and ends at 240456089 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR149   31536
Cards
Entrez_Gene (NCBI)MIR149  406941  microRNA 149
AliasesMIRN149; mir-149
GeneCards (Weizmann)MIR149
Ensembl hg19 (Hinxton)ENSG00000207611 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207611 [Gene_View]  ENSG00000207611 [Sequence]  chr2:240456001-240456089 [Contig_View]  MIR149 [Vega]
ICGC DataPortalENSG00000207611
TCGA cBioPortalMIR149
AceView (NCBI)MIR149
Genatlas (Paris)MIR149
WikiGenes406941
SOURCE (Princeton)MIR149
Genetics Home Reference (NIH)MIR149
miRBaseMIR149
dbDEMCMIR149
Genomic and cartography
GoldenPath hg38 (UCSC)MIR149  -     chr2:240456001-240456089 +  2q37.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR149  -     2q37.3   [Description]    (hg19-Feb_2009)
EnsemblMIR149 - 2q37.3 [CytoView hg19]  MIR149 - 2q37.3 [CytoView hg38]
Mapping of homologs : NCBIMIR149 [Mapview hg19]  MIR149 [Mapview hg38]
OMIM615209   
Gene and transcription
Genbank (Entrez)LM608518
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR149
Alternative Splicing GalleryENSG00000207611
Gene ExpressionMIR149 [ NCBI-GEO ]   MIR149 [ EBI - ARRAY_EXPRESS ]   MIR149 [ SEEK ]   MIR149 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR149 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406941
GTEX Portal (Tissue expression)MIR149
Human Protein AtlasENSG00000207611-MIR149 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR149
DMDM Disease mutations406941
Blocks (Seattle)MIR149
Human Protein Atlas [tissue]ENSG00000207611-MIR149 [tissue]
Protein Interaction databases
FunCoupENSG00000207611
BioGRIDMIR149
STRING (EMBL)MIR149
ZODIACMIR149
Ontologies - Pathways
Huge Navigator MIR149 [HugePedia]
snp3D : Map Gene to Disease406941
BioCentury BCIQMIR149
ClinGenMIR149
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406941
Chemical/Pharm GKB GenePA164722505
Clinical trialMIR149
Miscellaneous
canSAR (ICR)MIR149 (select the gene name)
Probes
Litterature
PubMed108 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR149
EVEXMIR149
GoPubMedMIR149
iHOPMIR149
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:20:36 CET 2018

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