Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR153-1 (microRNA 153-1)


Alias (NCBI)MIRN153-1
HGNC (Hugo) MIR153-1
HGNC Alias symbhsa-mir-153-1
HGNC Previous nameMIRN153-1
LocusID (NCBI) 406944
Atlas_Id 53278
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 219294111 and ends at 219294200 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)MIR153-1   31539
Entrez_Gene (NCBI)MIR153-1    microRNA 153-1
AliasesMIRN153-1; mir-153-1
GeneCards (Weizmann)MIR153-1
Ensembl hg19 (Hinxton)ENSG00000207647 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207647 [Gene_View]  ENSG00000207647 [Sequence]  chr2:219294111-219294200 [Contig_View]  MIR153-1 [Vega]
ICGC DataPortalENSG00000207647
TCGA cBioPortalMIR153-1
AceView (NCBI)MIR153-1
Genatlas (Paris)MIR153-1
SOURCE (Princeton)MIR153-1
Genetics Home Reference (NIH)MIR153-1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR153-1  -     chr2:219294111-219294200 -  2q35   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR153-1  -     2q35   [Description]    (hg19-Feb_2009)
GoldenPathMIR153-1 - 2q35 [CytoView hg19]  MIR153-1 - 2q35 [CytoView hg38]
genome Data Viewer NCBIMIR153-1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)LM608503
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR153-1
Alternative Splicing GalleryENSG00000207647
Gene ExpressionMIR153-1 [ NCBI-GEO ]   MIR153-1 [ EBI - ARRAY_EXPRESS ]   MIR153-1 [ SEEK ]   MIR153-1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR153-1 [ Firebrowse - Broad ]
GenevisibleExpression of MIR153-1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)406944
GTEX Portal (Tissue expression)MIR153-1
Human Protein AtlasENSG00000207647-MIR153-1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR153-1
Blocks (Seattle)MIR153-1
Human Protein Atlas [tissue]ENSG00000207647-MIR153-1 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed47 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:32:17 CET 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us