Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR153-2 (microRNA 153-2)

Identity

Alias_namesMIRN153-2
Alias_symbol (synonym)hsa-mir-153-2
Other aliasmir-153-2
HGNC (Hugo) MIR153-2
LocusID (NCBI) 406945
Atlas_Id 53279
Location 7q36.3  [Link to chromosome band 7q36]
Location_base_pair Starts at 157574336 and ends at 157574422 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR153-2   31540
Cards
Entrez_Gene (NCBI)MIR153-2  406945  microRNA 153-2
AliasesMIRN153-2; mir-153-2
GeneCards (Weizmann)MIR153-2
Ensembl hg19 (Hinxton)ENSG00000207960 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207960 [Gene_View]  chr7:157574336-157574422 [Contig_View]  MIR153-2 [Vega]
ICGC DataPortalENSG00000207960
TCGA cBioPortalMIR153-2
AceView (NCBI)MIR153-2
Genatlas (Paris)MIR153-2
WikiGenes406945
SOURCE (Princeton)MIR153-2
Genetics Home Reference (NIH)MIR153-2
miRBaseMIR153-2
dbDEMCMIR153-2
Genomic and cartography
GoldenPath hg38 (UCSC)MIR153-2  -     chr7:157574336-157574422 -  7q36.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR153-2  -     7q36.3   [Description]    (hg19-Feb_2009)
EnsemblMIR153-2 - 7q36.3 [CytoView hg19]  MIR153-2 - 7q36.3 [CytoView hg38]
Mapping of homologs : NCBIMIR153-2 [Mapview hg19]  MIR153-2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM608504
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR153-2
Alternative Splicing GalleryENSG00000207960
Gene ExpressionMIR153-2 [ NCBI-GEO ]   MIR153-2 [ EBI - ARRAY_EXPRESS ]   MIR153-2 [ SEEK ]   MIR153-2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR153-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406945
GTEX Portal (Tissue expression)MIR153-2
Human Protein AtlasENSG00000207960-MIR153-2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR153-2
DMDM Disease mutations406945
Blocks (Seattle)MIR153-2
Human Protein Atlas [tissue]ENSG00000207960-MIR153-2 [tissue]
Protein Interaction databases
FunCoupENSG00000207960
BioGRIDMIR153-2
STRING (EMBL)MIR153-2
ZODIACMIR153-2
Ontologies - Pathways
Huge Navigator MIR153-2 [HugePedia]
snp3D : Map Gene to Disease406945
BioCentury BCIQMIR153-2
ClinGenMIR153-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406945
Chemical/Pharm GKB GenePA164722510
Clinical trialMIR153-2
Miscellaneous
canSAR (ICR)MIR153-2 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR153-2
EVEXMIR153-2
GoPubMedMIR153-2
iHOPMIR153-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:22:48 CET 2017

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