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MIR1539 (microRNA 1539)

Identity

Alias_namesMIRN1539
Alias_symbol (synonym)hsa-mir-1539
Other alias
HGNC (Hugo) MIR1539
LocusID (NCBI) 100302257
Atlas_Id 69087
Location 18q21.1  [Link to chromosome band 18q21]
Location_base_pair Starts at 49487373 and ends at 49487422 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR1539   35383
Cards
Entrez_Gene (NCBI)MIR1539  100302257  microRNA 1539
AliasesMIRN1539; hsa-mir-1539
GeneCards (Weizmann)MIR1539
Ensembl hg19 (Hinxton)ENSG00000278544 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278544 [Gene_View]  chr18:49487373-49487422 [Contig_View]  MIR1539 [Vega]
ICGC DataPortalENSG00000278544
TCGA cBioPortalMIR1539
AceView (NCBI)MIR1539
Genatlas (Paris)MIR1539
WikiGenes100302257
SOURCE (Princeton)MIR1539
Genetics Home Reference (NIH)MIR1539
miRBaseMIR1539
dbDEMCMIR1539
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1539  -     chr18:49487373-49487422 +  18q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1539  -     18q21.1   [Description]    (hg19-Feb_2009)
EnsemblMIR1539 - 18q21.1 [CytoView hg19]  MIR1539 - 18q21.1 [CytoView hg38]
Mapping of homologs : NCBIMIR1539 [Mapview hg19]  MIR1539 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR1539
Alternative Splicing GalleryENSG00000278544
Gene ExpressionMIR1539 [ NCBI-GEO ]   MIR1539 [ EBI - ARRAY_EXPRESS ]   MIR1539 [ SEEK ]   MIR1539 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1539 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302257
GTEX Portal (Tissue expression)MIR1539
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1539
DMDM Disease mutations100302257
Blocks (Seattle)MIR1539
Human Protein AtlasENSG00000278544
Protein Interaction databases
FunCoupENSG00000278544
BioGRIDMIR1539
STRING (EMBL)MIR1539
ZODIACMIR1539
Ontologies - Pathways
Huge Navigator MIR1539 [HugePedia]
snp3D : Map Gene to Disease100302257
BioCentury BCIQMIR1539
ClinGenMIR1539
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302257
Chemical/Pharm GKB GenePA164722513
Clinical trialMIR1539
Miscellaneous
canSAR (ICR)MIR1539 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1539
EVEXMIR1539
GoPubMedMIR1539
iHOPMIR1539
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:26:33 CEST 2017

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