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MIR16-1 (microRNA 16-1)

Identity

Alias_namesMIRN16-1
Alias_symbol (synonym)hsa-mir-16-1
Other aliasmiRNA16-1
mir-16-1
HGNC (Hugo) MIR16-1
LocusID (NCBI) 406950
Atlas_Id 50185
Location 13q14.2  [Link to chromosome band 13q14]
Location_base_pair Starts at 50048973 and ends at 50049061 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  del(13q) in chronic lymphocytic leukemia


External links

Nomenclature
HGNC (Hugo)MIR16-1   31545
Cards
Entrez_Gene (NCBI)MIR16-1  406950  microRNA 16-1
AliasesMIRN16-1; miRNA16-1; mir-16-1
GeneCards (Weizmann)MIR16-1
Ensembl hg19 (Hinxton)ENSG00000208006 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000208006 [Gene_View]  chr13:50048973-50049061 [Contig_View]  MIR16-1 [Vega]
ICGC DataPortalENSG00000208006
TCGA cBioPortalMIR16-1
AceView (NCBI)MIR16-1
Genatlas (Paris)MIR16-1
WikiGenes406950
SOURCE (Princeton)MIR16-1
Genetics Home Reference (NIH)MIR16-1
miRBaseMIR16-1
dbDEMCMIR16-1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR16-1  -     chr13:50048973-50049061 -  13q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR16-1  -     13q14.2   [Description]    (hg19-Feb_2009)
EnsemblMIR16-1 - 13q14.2 [CytoView hg19]  MIR16-1 - 13q14.2 [CytoView hg38]
Mapping of homologs : NCBIMIR16-1 [Mapview hg19]  MIR16-1 [Mapview hg38]
OMIM609704   
Gene and transcription
Genbank (Entrez)AF480551 AJ421734 LM608159
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR16-1
Alternative Splicing GalleryENSG00000208006
Gene ExpressionMIR16-1 [ NCBI-GEO ]   MIR16-1 [ EBI - ARRAY_EXPRESS ]   MIR16-1 [ SEEK ]   MIR16-1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR16-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406950
GTEX Portal (Tissue expression)MIR16-1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR16-1
DMDM Disease mutations406950
Blocks (Seattle)MIR16-1
Human Protein AtlasENSG00000208006
Protein Interaction databases
FunCoupENSG00000208006
BioGRIDMIR16-1
STRING (EMBL)MIR16-1
ZODIACMIR16-1
Ontologies - Pathways
Huge Navigator MIR16-1 [HugePedia]
snp3D : Map Gene to Disease406950
BioCentury BCIQMIR16-1
ClinGenMIR16-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406950
Chemical/Pharm GKB GenePA164722518
Clinical trialMIR16-1
Miscellaneous
canSAR (ICR)MIR16-1 (select the gene name)
Probes
Litterature
PubMed139 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR16-1
EVEXMIR16-1
GoPubMedMIR16-1
iHOPMIR16-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:43:27 CEST 2017

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