Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR17 (microRNA 17)

Identity

Alias_namesMIRN17
Alias_symbol (synonym)hsa-mir-17
Other aliasMIR17-5p
MIR91
MIRN91
miR-17
miR17-3p
miRNA17
miRNA91
HGNC (Hugo) MIR17
LocusID (NCBI) 406952
Atlas_Id 45644
Location 13q31.3  [Link to chromosome band 13q31]
Location_base_pair Starts at 91350605 and ends at 91350688 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR17   31547
Cards
Entrez_Gene (NCBI)MIR17  406952  microRNA 17
AliasesMIR17-5p; MIR91; MIRN17; MIRN91; 
hsa-mir-17; miR-17; miR17-3p; miRNA17; miRNA91
GeneCards (Weizmann)MIR17
Ensembl hg19 (Hinxton)ENSG00000275042 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000275042 [Gene_View]  chr13:91350605-91350688 [Contig_View]  MIR17 [Vega]
ICGC DataPortalENSG00000275042
TCGA cBioPortalMIR17
AceView (NCBI)MIR17
Genatlas (Paris)MIR17
WikiGenes406952
SOURCE (Princeton)MIR17
Genetics Home Reference (NIH)MIR17
miRBaseMIR17
dbDEMCMIR17
Genomic and cartography
GoldenPath hg38 (UCSC)MIR17  -     chr13:91350605-91350688 +  13q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR17  -     13q31.3   [Description]    (hg19-Feb_2009)
EnsemblMIR17 - 13q31.3 [CytoView hg19]  MIR17 - 13q31.3 [CytoView hg38]
Mapping of homologs : NCBIMIR17 [Mapview hg19]  MIR17 [Mapview hg38]
OMIM609416   
Gene and transcription
Genbank (Entrez)AF480529 AF480562 AJ421735 LM608160
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR17
Alternative Splicing GalleryENSG00000275042
Gene ExpressionMIR17 [ NCBI-GEO ]   MIR17 [ EBI - ARRAY_EXPRESS ]   MIR17 [ SEEK ]   MIR17 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406952
GTEX Portal (Tissue expression)MIR17
Human Protein AtlasENSG00000275042-MIR17 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR17
DMDM Disease mutations406952
Blocks (Seattle)MIR17
Human Protein Atlas [tissue]ENSG00000275042-MIR17 [tissue]
Protein Interaction databases
FunCoupENSG00000275042
BioGRIDMIR17
STRING (EMBL)MIR17
ZODIACMIR17
Ontologies - Pathways
Huge Navigator MIR17 [HugePedia]
snp3D : Map Gene to Disease406952
BioCentury BCIQMIR17
ClinGenMIR17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406952
Chemical/Pharm GKB GenePA164722520
Clinical trialMIR17
Miscellaneous
canSAR (ICR)MIR17 (select the gene name)
Probes
Litterature
PubMed157 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR17
EVEXMIR17
GoPubMedMIR17
iHOPMIR17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:22:50 CET 2017

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