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MIR188 (microRNA 188)

Identity

Alias_namesMIRN188
Alias_symbol (synonym)hsa-mir-188
Other aliasmiR-188
HGNC (Hugo) MIR188
LocusID (NCBI) 406964
Atlas_Id 55857
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 50003503 and ends at 50003588 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR188   31559
Cards
Entrez_Gene (NCBI)MIR188  406964  microRNA 188
AliasesMIRN188; miR-188
GeneCards (Weizmann)MIR188
Ensembl hg19 (Hinxton)ENSG00000207768 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207768 [Gene_View]  chrX:50003503-50003588 [Contig_View]  MIR188 [Vega]
ICGC DataPortalENSG00000207768
TCGA cBioPortalMIR188
AceView (NCBI)MIR188
Genatlas (Paris)MIR188
WikiGenes406964
SOURCE (Princeton)MIR188
Genetics Home Reference (NIH)MIR188
miRBaseMIR188
dbDEMCMIR188
Genomic and cartography
GoldenPath hg38 (UCSC)MIR188  -     chrX:50003503-50003588 +  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR188  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblMIR188 - Xp11.23 [CytoView hg19]  MIR188 - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIMIR188 [Mapview hg19]  MIR188 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY194168 LM608524
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR188
Alternative Splicing GalleryENSG00000207768
Gene ExpressionMIR188 [ NCBI-GEO ]   MIR188 [ EBI - ARRAY_EXPRESS ]   MIR188 [ SEEK ]   MIR188 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR188 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406964
GTEX Portal (Tissue expression)MIR188
Human Protein AtlasENSG00000207768-MIR188 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR188
DMDM Disease mutations406964
Blocks (Seattle)MIR188
Human Protein Atlas [tissue]ENSG00000207768-MIR188 [tissue]
Protein Interaction databases
FunCoupENSG00000207768
BioGRIDMIR188
STRING (EMBL)MIR188
ZODIACMIR188
Ontologies - Pathways
Huge Navigator MIR188 [HugePedia]
snp3D : Map Gene to Disease406964
BioCentury BCIQMIR188
ClinGenMIR188
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406964
Chemical/Pharm GKB GenePA164722536
Clinical trialMIR188
Miscellaneous
canSAR (ICR)MIR188 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR188
EVEXMIR188
GoPubMedMIR188
iHOPMIR188
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:46:23 CET 2017

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