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MIR197 (microRNA 197)

Identity

Alias (NCBI)MIRN197
miR-197
miRNA197
HGNC (Hugo) MIR197
HGNC Alias symbhsa-mir-197
HGNC Previous nameMIRN197
LocusID (NCBI) 406974
Atlas_Id 53280
Location 1p13.3  [Link to chromosome band 1p13]
Location_base_pair Starts at 109598893 and ends at 109598967 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR197   31569
Cards
Entrez_Gene (NCBI)MIR197    microRNA 197
AliasesMIRN197; miR-197; miRNA197
GeneCards (Weizmann)MIR197
Ensembl hg19 (Hinxton)ENSG00000284443 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000284443 [Gene_View]  ENSG00000284443 [Sequence]  chr1:109598893-109598967 [Contig_View]  MIR197 [Vega]
ICGC DataPortalENSG00000284443
TCGA cBioPortalMIR197
AceView (NCBI)MIR197
Genatlas (Paris)MIR197
SOURCE (Princeton)MIR197
Genetics Home Reference (NIH)MIR197
miRBaseMIR197
dbDEMCMIR197
Genomic and cartography
GoldenPath hg38 (UCSC)MIR197  -     chr1:109598893-109598967 +  1p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR197  -     1p13.3   [Description]    (hg19-Feb_2009)
GoldenPathMIR197 - 1p13.3 [CytoView hg19]  MIR197 - 1p13.3 [CytoView hg38]
ImmunoBaseENSG00000284443
genome Data Viewer NCBIMIR197 [Mapview hg19]  
OMIM611189   
Gene and transcription
Genbank (Entrez)AJ560754 LM608319
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR197
Alternative Splicing GalleryENSG00000284443
Gene ExpressionMIR197 [ NCBI-GEO ]   MIR197 [ EBI - ARRAY_EXPRESS ]   MIR197 [ SEEK ]   MIR197 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR197 [ Firebrowse - Broad ]
GenevisibleExpression of MIR197 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)406974
GTEX Portal (Tissue expression)MIR197
Human Protein AtlasENSG00000284443-MIR197 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR197
Blocks (Seattle)MIR197
Human Protein Atlas [tissue]ENSG00000284443-MIR197 [tissue]
Protein Interaction databases
BioGRIDMIR197
STRING (EMBL)MIR197
ZODIACMIR197
Ontologies - Pathways
Litterature
PubMed58 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMIR197
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:32:27 CET 2021

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