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MIR197 (microRNA 197)

Identity

Alias_namesMIRN197
Alias_symbol (synonym)hsa-mir-197
Other aliasmiR-197
miRNA197
HGNC (Hugo) MIR197
LocusID (NCBI) 406974
Atlas_Id 53280
Location 1p13.3  [Link to chromosome band 1p13]
Location_base_pair Starts at 109598893 and ends at 109598967 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR197   31569
Cards
Entrez_Gene (NCBI)MIR197  406974  microRNA 197
AliasesMIRN197; miR-197; miRNA197
GeneCards (Weizmann)MIR197
Ensembl hg19 (Hinxton)ENSG00000207709 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207709 [Gene_View]  chr1:109598893-109598967 [Contig_View]  MIR197 [Vega]
ICGC DataPortalENSG00000207709
TCGA cBioPortalMIR197
AceView (NCBI)MIR197
Genatlas (Paris)MIR197
WikiGenes406974
SOURCE (Princeton)MIR197
Genetics Home Reference (NIH)MIR197
miRBaseMIR197
dbDEMCMIR197
Genomic and cartography
GoldenPath hg38 (UCSC)MIR197  -     chr1:109598893-109598967 +  1p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR197  -     1p13.3   [Description]    (hg19-Feb_2009)
EnsemblMIR197 - 1p13.3 [CytoView hg19]  MIR197 - 1p13.3 [CytoView hg38]
Mapping of homologs : NCBIMIR197 [Mapview hg19]  MIR197 [Mapview hg38]
OMIM611189   
Gene and transcription
Genbank (Entrez)AJ560754 LM608319
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR197
Alternative Splicing GalleryENSG00000207709
Gene ExpressionMIR197 [ NCBI-GEO ]   MIR197 [ EBI - ARRAY_EXPRESS ]   MIR197 [ SEEK ]   MIR197 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR197 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)406974
GTEX Portal (Tissue expression)MIR197
Human Protein AtlasENSG00000207709-MIR197 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR197
DMDM Disease mutations406974
Blocks (Seattle)MIR197
Human Protein Atlas [tissue]ENSG00000207709-MIR197 [tissue]
Protein Interaction databases
FunCoupENSG00000207709
BioGRIDMIR197
STRING (EMBL)MIR197
ZODIACMIR197
Ontologies - Pathways
Huge Navigator MIR197 [HugePedia]
snp3D : Map Gene to Disease406974
BioCentury BCIQMIR197
ClinGenMIR197
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD406974
Chemical/Pharm GKB GenePA164722559
Clinical trialMIR197
Miscellaneous
canSAR (ICR)MIR197 (select the gene name)
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR197
EVEXMIR197
GoPubMedMIR197
iHOPMIR197
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:59:18 CET 2017

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