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MIR1972-1 (microRNA 1972-1)

Identity

Alias_namesMIR1972
microRNA 1972
Alias_symbol (synonym)hsa-mir-1972
Other aliashsa-mir-1972-1
HGNC (Hugo) MIR1972-1
LocusID (NCBI) 100302243
Atlas_Id 69098
Location 16p13.11  [Link to chromosome band 16p13]
Location_base_pair Starts at 15010321 and ends at 15010397 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR1972-1   37060
Cards
Entrez_Gene (NCBI)MIR1972-1  100302243  microRNA 1972-1
AliasesMIR1972; hsa-mir-1972; hsa-mir-1972-1
GeneCards (Weizmann)MIR1972-1
Ensembl hg19 (Hinxton)ENSG00000238728 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238728 [Gene_View]  chr16:15010321-15010397 [Contig_View]  MIR1972-1 [Vega]
ICGC DataPortalENSG00000238728
TCGA cBioPortalMIR1972-1
AceView (NCBI)MIR1972-1
Genatlas (Paris)MIR1972-1
WikiGenes100302243
SOURCE (Princeton)MIR1972-1
Genetics Home Reference (NIH)MIR1972-1
miRBaseMIR1972-1
dbDEMCMIR1972-1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR1972-1  -     chr16:15010321-15010397 -  16p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR1972-1  -     16p13.11   [Description]    (hg19-Feb_2009)
EnsemblMIR1972-1 - 16p13.11 [CytoView hg19]  MIR1972-1 - 16p13.11 [CytoView hg38]
Mapping of homologs : NCBIMIR1972-1 [Mapview hg19]  MIR1972-1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187607
Consensus coding sequences : CCDS (NCBI)MIR1972-1
Alternative Splicing GalleryENSG00000238728
Gene ExpressionMIR1972-1 [ NCBI-GEO ]   MIR1972-1 [ EBI - ARRAY_EXPRESS ]   MIR1972-1 [ SEEK ]   MIR1972-1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR1972-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302243
GTEX Portal (Tissue expression)MIR1972-1
Human Protein AtlasENSG00000238728-MIR1972-1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR1972-1
DMDM Disease mutations100302243
Blocks (Seattle)MIR1972-1
Human Protein Atlas [tissue]ENSG00000238728-MIR1972-1 [tissue]
Protein Interaction databases
FunCoupENSG00000238728
BioGRIDMIR1972-1
STRING (EMBL)MIR1972-1
ZODIACMIR1972-1
Ontologies - Pathways
Huge Navigator MIR1972-1 [HugePedia]
snp3D : Map Gene to Disease100302243
BioCentury BCIQMIR1972-1
ClinGenMIR1972-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302243
Clinical trialMIR1972-1
Miscellaneous
canSAR (ICR)MIR1972-1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR1972-1
EVEXMIR1972-1
GoPubMedMIR1972-1
iHOPMIR1972-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:13:13 CET 2017

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